RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 CCDC38Q502W7 563 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 LACTB2Q53H82 288 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 PTRHD1Q6GMV3 140 aaKnown RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 AFTPHQ6ULP2 937 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 SDCCAG8Q86SQ7 713 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 SYVN1Q86TM6 617 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 OTUD6BQ8N6M0 293 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 TRIM58Q8NG06 486 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 DENND1AQ8TEH3 1009 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 CT55Q8WUE5 264 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 NAT14Q8WUY8 206 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 THAP4Q8WY91 577 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 ATG4AQ8WYN0 398 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 PEX13Q92968 403 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 SLC22A18Q96BI1 424 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 ZNF501Q96CX3 271 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 DPH2Q9BQC3 489 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 HGH1Q9BTY7 390 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 CARD6Q9BX69 1037 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 TLR10Q9BXR5 811 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 ACTR5Q9H9F9 607 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 LZTFL1Q9NQ48 299 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 ZNF71Q9NQZ8 489 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 ACSS2Q9NR19 701 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 IRAK4Q9NWZ3 460 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 ACTR10Q9NZ32 417 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.95□□□□□ -1.3
NUP43-206ENST00000543637 POMT2Q9UKY4 750 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 BTRCQ9Y297 605 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 ZKSCAN5Q9Y2L8 839 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 KCNMB2Q9Y691 235 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 CAPN6Q9Y6Q1 641 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 PTPRQQ9UMZ3 2332 aa6.95□□□□□ -1.3
NUP43-206ENST00000543637 CCDC88CQ9P219 2028 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CFAP47Q6ZTR5 3102 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 A0A0U1RQJ8 604 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 OR51F1A6NGY5 319 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 C9J4A7 227 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 MEN1O00255 615 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 BTN3A3O00478 584 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 BTN3A1O00481 513 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CD3EAPO15446 510 aaKnown RBP6.94□□□□□ -1.3
NUP43-206ENST00000543637 CEP104O60308 925 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 RAB40ALP0C0E4 278 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 PRSS56P0CW18 603 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 ETS1P14921 441 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 F8A1P23610 371 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 FOXN2P32314 431 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CCL11P51671 97 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CSE1LP55060 971 aaKnown RBP6.94□□□□□ -1.3
NUP43-206ENST00000543637 ITGA1P56199 1179 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 HSPA14Q0VDF9 509 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 ABRQ12979 859 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 SEMA5AQ13591 1074 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 TMED2Q15363 201 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 OASLQ15646 514 aaKnown RBP6.94□□□□□ -1.3
NUP43-206ENST00000543637 UGT8Q16880 541 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
NUP43-206ENST00000543637 TCTN3Q6NUS6 607 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 FBXO38Q6PIJ6 1188 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 PACS1Q6VY07 963 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 UNC5AQ6ZN44 842 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 ADGRF3Q8IZF5 1079 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 DSELQ8IZU8 1212 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 OR5AR1Q8NGP9 310 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 OR5K2Q8NHB8 316 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CFAP61Q8NHU2 1237 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 MAGEC3Q8TD91 643 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 TCTN2Q96GX1 697 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 SGSM3Q96HU1 749 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 FOPNLQ96NB1 174 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 LRFN5Q96NI6 719 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 TRAPPC9Q96Q05 1148 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 PANX3Q96QZ0 392 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 C17orf62Q9BQA9 187 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 NLNQ9BYT8 704 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 IL22Q9GZX6 179 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 ACTL8Q9H568 366 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 XKR8Q9H6D3 395 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CASS4Q9NQ75 786 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 CATSPERZQ9NTU4 200 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 INTS7Q9NVH2 962 aaKnown RBP6.94□□□□□ -1.3
NUP43-206ENST00000543637 OR6C2Q9NZP2 312 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 TLK1Q9UKI8 766 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 SLC39A10Q9ULF5 831 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 SNX7Q9UNH6 387 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 TCAF1Q9Y4C2 921 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 AP1M2Q9Y6Q5 423 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 NBEAQ8NFP9 2946 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 WDFY3Q8IZQ1 3526 aa6.94□□□□□ -1.3
NUP43-206ENST00000543637 DSPP15924 2871 aaKnown RBP6.93□□□□□ -1.3
NUP43-206ENST00000543637 A0A0J9YY10 115 aa6.93□□□□□ -1.3
NUP43-206ENST00000543637 SLC5A10A0PJK1 596 aa6.93□□□□□ -1.3
NUP43-206ENST00000543637 MAGEB16A2A368 324 aa6.93□□□□□ -1.3
NUP43-206ENST00000543637 PRMT5O14744 637 aaPredicted RBP6.93□□□□□ -1.3
NUP43-206ENST00000543637 ZNF749O43361 778 aa6.93□□□□□ -1.3
NUP43-206ENST00000543637 KLHL41O60662 606 aa6.93□□□□□ -1.3
NUP43-206ENST00000543637 OR2B3O76000 313 aa6.93□□□□□ -1.3
NUP43-206ENST00000543637 TIAF1O95411 115 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms