RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CLCNKAP51800 687 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 CTBSQ01459 385 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 C1orf61Q13536 156 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 BCL7AQ4VC05 210 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 TECRLQ5HYJ1 363 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 CES4AQ5XG92 561 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 OGFOD3Q6PK18 319 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 TBC1D1Q86TI0 1168 aaPredicted RBP10.38□□□□□ -0.75
ATL3-204ENST00000540699 LRRTM4Q86VH4 590 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 GKN2Q86XP6 184 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 EID2Q8N6I1 236 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 RASGEF1AQ8N9B8 481 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 RAB3IL1Q8TBN0 382 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 RDH11Q8TC12 318 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 LKAAEAR1Q8TD35 194 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 CD200R1Q8TD46 325 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 LRRC8CQ8TDW0 803 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 SETD7Q8WTS6 366 aaKnown RBP10.38□□□□□ -0.75
ATL3-204ENST00000540699 ZNF514Q96K75 400 aaPredicted RBP10.38□□□□□ -0.75
ATL3-204ENST00000540699 CAMK1GQ96NX5 476 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 CCT8L2Q96SF2 557 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 TTC1Q99614 292 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 COPS8Q99627 209 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 GPR21Q99679 349 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 SLC30A3Q99726 388 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 CDC6Q99741 560 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 TIMM29Q9BSF4 260 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 DUSP23Q9BVJ7 150 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 CCDC68Q9H2F9 335 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 TAS2R13Q9NYV9 303 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 GALPQ9UBC7 116 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 COPG2Q9UBF2 871 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 RUVBL2Q9Y230 463 aaKnown RBP10.38□□□□□ -0.75
ATL3-204ENST00000540699 DNMT3AQ9Y6K1 912 aaPredicted RBP10.38□□□□□ -0.75
ATL3-204ENST00000540699 LOC400499M0QZD8 3231 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 ATRXP46100 2492 aa10.38□□□□□ -0.75
ATL3-204ENST00000540699 PTPRBP23467 1997 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 KNTC1P50748 2209 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 LY6G6EA0A0G2JKS1 128 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 SPAARA0A1B0GVQ0 90 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 KLHL33A6NCF5 533 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 H3BMM5 538 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 TK2O00142 265 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 KMOO15229 486 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 SIGLEC6O43699 453 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 HYAL3O43820 417 aaPredicted RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 KCNJ13O60928 360 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 VPS26AO75436 327 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 TSPAN12O95859 305 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 APOA4P06727 396 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ANXA6P08133 673 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 CCDC166P0CW27 439 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ALPPL2P10696 532 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 FGF3P11487 239 aaPredicted RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 CD1DP15813 335 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 BGNP21810 368 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ALDH3A1P30838 453 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 NSG1P42857 185 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 KPNA2P52292 529 aaKnown RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 CTSCP53634 463 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 DMPKQ09013 629 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
ATL3-204ENST00000540699 GTF2H3Q13889 308 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 CSHL1Q14406 222 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 FAM83EQ2M2I3 478 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 C6orf132Q5T0Z8 1188 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 AGAP9Q5VTM2 703 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 CGB2Q6NT52 195 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ZCCHC8Q6NZY4 707 aaKnown RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 PAQR3Q6TCH7 311 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ZYG11AQ6WRX3 759 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 C17orf82Q86X59 251 aaPredicted RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 TRIM42Q8IWZ5 723 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 COL27A1Q8IZC6 1860 aaPredicted RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 SPATA6LQ8N4H0 392 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 CCL4L1Q8NHW4 92 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 BCAS4Q8TDM0 211 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 RHBDD1Q8TEB9 315 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ZNF473Q8WTR7 871 aaKnown RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 LINC00615Q96LM1 132 aaPredicted RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 TSNARE1Q96NA8 513 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 MRPL57Q9BQC6 102 aaKnown RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 GSDMCQ9BYG8 508 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 MRPL46Q9H2W6 279 aaKnown RBP10.37□□□□□ -0.75
ATL3-204ENST00000540699 RABEP2Q9H5N1 569 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 MANSC1Q9H8J5 431 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 SYTL2Q9HCH5 934 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 LATS2Q9NRM7 1088 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 FGFR1OP2Q9NVK5 253 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 XPR1Q9UBH6 696 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 ZNHIT2Q9UHR6 403 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 MOSPD1Q9UJG1 213 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 GNPTGQ9UJJ9 305 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 MID2Q9UJV3 735 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 DHRS7Q9Y394 339 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 PLEKHM1Q9Y4G2 1056 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 NEUROG3Q9Y4Z2 214 aa10.37□□□□□ -0.75
ATL3-204ENST00000540699 U3KQA8 63 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms