RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PTGR2Q8N8N7 351 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 RHEBL1Q8TAI7 183 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 LRRC8CQ8TDW0 803 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 DNASE2BQ8WZ79 361 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 PIGKQ92643 395 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 RMDN2Q96LZ7 410 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 ATOH8Q96SQ7 321 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 TMEM168Q9H0V1 697 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 TCEAL2Q9H3H9 227 aaPredicted RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 CAAP1Q9H8G2 361 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 NCKIPSDQ9NZQ3 722 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 GULP1Q9UBP9 304 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 APOBEC3BQ9UH17 382 aaKnown RBP13.82□□□□□ -0.2
CD4-208ENST00000538827 OARD1Q9Y530 152 aa13.82□□□□□ -0.2
CD4-208ENST00000538827 A8MT66 165 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 G3V2L1 256 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 LRP3O75074 770 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 JUNDP17535 347 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 IDSP22304 550 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 ATP5F1P24539 256 aaPredicted RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 RPL10P27635 214 aaKnown RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 MAP4P27816 1152 aaKnown RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 CNR2P34972 360 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 AFF3P51826 1226 aaKnown RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 HK3P52790 923 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 NXPH1P58417 271 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 SHC2P98077 582 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 CTBSQ01459 385 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 DMPKQ09013 629 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 OVGP1Q12889 678 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 LPAL2Q16609 132 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 PHKG1Q16816 387 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 SBSNQ6UWP8 590 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 CYHR1Q6ZMK1 362 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 SPATS2Q86XZ4 545 aaKnown RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 TRIM42Q8IWZ5 723 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 CCL4L1Q8NHW4 92 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 PHF21BQ96EK2 531 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 C12orf66Q96MD2 445 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 GSDMCQ9BYG8 508 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 TRIM54Q9BYV2 358 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 DPEP2Q9H4A9 486 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 WWOXQ9NZC7 414 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 SUSD2Q9UGT4 822 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 CIDEBQ9UHD4 219 aa13.81□□□□□ -0.2
CD4-208ENST00000538827 CFAP20Q9Y6A4 193 aaKnown RBP13.81□□□□□ -0.2
CD4-208ENST00000538827 A0A1B0GTW7 788 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 A0A1B0GVT2 93 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 ARHGEF33A8MVX0 844 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 VILLO15195 856 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 BIRC5O15392 142 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 DLX3O60479 287 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 KCNJ13O60928 360 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 HIST1H2AGP0C0S8 130 aaPredicted RBP13.8□□□□□ -0.2
CD4-208ENST00000538827 TPBGLP0DKB5 382 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 HIST1H2ADP20671 130 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 HALP42357 657 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 MAPK9P45984 424 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 BLKP51451 505 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 CBX1P83916 185 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 ASPHQ12797 758 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 C1orf61Q13536 156 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 LRP8Q14114 963 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 TGFBIQ15582 683 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 PDK4Q16654 411 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 PPP1R3AQ16821 1122 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 LIPMQ5VYY2 423 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 MBOAT1Q6ZNC8 495 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 CCNYL1Q8N7R7 359 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
CD4-208ENST00000538827 C1orf216Q8TAB5 229 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 NELL1Q92832 810 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 HIST1H2AHQ96KK5 128 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 MAGEB18Q96M61 343 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 HIST1H2AJQ99878 128 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 H2AFJQ9BTM1 129 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 HGH1Q9BTY7 390 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 OR52A5Q9H2C5 316 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 ACSS2Q9NR19 701 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 IMP3Q9NV31 184 aaKnown RBP13.8□□□□□ -0.2
CD4-208ENST00000538827 ARL15Q9NXU5 204 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 ACSL5Q9ULC5 683 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 TMCO1Q9UM00 188 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 ASF1AQ9Y294 204 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 DGKBQ9Y6T7 804 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 GON4LQ3T8J9 2241 aa13.8□□□□□ -0.2
CD4-208ENST00000538827 CNOT1A5YKK6 2376 aaKnown RBP13.8□□□□□ -0.2
CD4-208ENST00000538827 ZFYVE26Q68DK2 2539 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 CCDC189A1A4V9 331 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 KRT87PA6NCN2 255 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 TARM1B6A8C7 271 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 SLC16A5O15375 505 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 FFAR2O15552 330 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 FOXD2O60548 495 aaPredicted RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 PSIP1O75475 530 aaKnown RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 MATN4O95460 622 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 CFIP05156 583 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms