RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ISCUQ9H1K1 167 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TNMDQ9H2S6 317 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 FN3KQ9H479 309 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TBC1D17Q9HA65 648 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TUFT1Q9NNX1 390 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 FBXL2Q9UKC9 423 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 NME7Q9Y5B8 376 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 PRAG1Q86YV5 1406 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 GOLGA6L9A6NEM1 432 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 YDJCA8MPS7 323 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 H0YGN5 161 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 PLK4O00444 970 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 MEIS2O14770 477 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 TNFRSF13BO14836 293 aaPredicted RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 TIMM23O14925 209 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 PGRMC2O15173 223 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 NDUFS7O75251 213 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 SEC22BO75396 215 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 PLA2G4BP0C869 781 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 ARSBP15848 533 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 NAGAP17050 411 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 GAP43P17677 238 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 ITIH1P19827 911 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 ACAT1P24752 427 aaKnown RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 SLC9A3P48764 834 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CTSCP53634 463 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CLDN20P56880 219 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 KIAA1024LP59773 190 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CD81P60033 236 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 NPRL3Q12980 569 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 FUT11Q495W5 492 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 C9orf50Q5SZB4 431 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 PRR27Q6MZM9 219 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 BRAT1Q6PJG6 821 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 NHLRC1Q6VVB1 395 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 TMEM182Q6ZP80 229 aaPredicted RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 Q6ZSV7 163 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 KCTD9Q7L273 389 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CNTN4Q8IWV2 1026 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CLYBLQ8N0X4 340 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 IQCF1Q8N6M8 205 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 ZNF611Q8N823 705 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 OIT3Q8WWZ8 545 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 NR4A3Q92570 626 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 RAD54LQ92698 747 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 ST6GALNAC6Q969X2 333 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 SFXN2Q96NB2 322 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CACNG6Q9BXT2 260 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 DPAGT1Q9H3H5 408 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CATSPERBQ9H7T0 1116 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 HHATLQ9HCP6 504 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 MYNNQ9NPC7 610 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 IARS2Q9NSE4 1012 aaKnown RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 DNAJC17Q9NVM6 304 aaKnown RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 EPS15L1Q9UBC2 864 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 RHCGQ9UBD6 479 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 IL36RNQ9UBH0 155 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 CPSF3Q9UKF6 684 aaKnown RBP4.24□□□□□ -1.73
USP47-211ENST00000531513 PADI3Q9ULW8 664 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 PADI2Q9Y2J8 665 aa4.24□□□□□ -1.73
USP47-211ENST00000531513 OR2M5A3KFT3 312 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SMIM30A4D0T7 59 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SDR42E2A6NKP2 422 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 ACOT8O14734 319 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SELENOFO60613 162 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SOX30O94993 753 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 INHBAP08476 426 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 UROSP10746 265 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 CD22P20273 847 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 CD27P26842 260 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 RPL3P39023 403 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 CD86P42081 329 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 GMPSP49915 693 aaPredicted RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 SLC12A3P55017 1021 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 NME5P56597 212 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 ARF5P84085 180 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 LTBQ06643 244 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 TROAPQ12815 778 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 KEAP1Q14145 624 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 NFATC4Q14934 902 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 RPS6KA1Q15418 735 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 CTF1Q16619 201 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 AMZ1Q400G9 498 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 SETMARQ53H47 684 aaPredicted RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 GSG1LQ6UXU4 331 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 CATSPER4Q7RTX7 472 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 RABEPKQ7Z6M1 372 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 CUZD1Q86UP6 607 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 GPR180Q86V85 440 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 CHERPQ8IWX8 916 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 PEX5LQ8IYB4 626 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 RTL3Q8N8U3 475 aaKnown RBP4.23□□□□□ -1.73
USP47-211ENST00000531513 MIGA1Q8NAN2 632 aa4.23□□□□□ -1.73
USP47-211ENST00000531513 OR2AK2Q8NG84 335 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms