RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 C7orf57Q8NEG2 295 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SLC44A1Q8WWI5 657 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 DNAAF4Q8WXU2 420 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SMPDL3BQ92485 455 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 CENPTQ96BT3 561 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 FAM81BQ96LP2 452 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ZNF582Q96NG8 517 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 PCYT2Q99447 389 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 KXD1Q9BQD3 176 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SEZ6LQ9BYH1 1024 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 XPO4Q9C0E2 1151 aaKnown RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SLC5A7Q9GZV3 580 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 FN3KQ9H479 309 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 PLAC1Q9HBJ0 212 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 PCDH9Q9HC56 1237 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 HHATLQ9HCP6 504 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 OSER1Q9NX31 292 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 CYP39A1Q9NYL5 469 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 VPS18Q9P253 973 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 MOSPD1Q9UJG1 213 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ODF2LQ9ULJ1 636 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 PADI2Q9Y2J8 665 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ATXN2Q99700 1313 aaKnown RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 HEG1Q9ULI3 1381 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 PRSS51A0A1B0GVH4 220 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 SDR42E2A6NKP2 422 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 PGRMC2O15173 223 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 AP5Z1O43299 807 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 SEC22BO75396 215 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 MOCS3O95396 460 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 TOMM40O96008 361 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 RLN1P04808 185 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 RPL3P39023 403 aaKnown RBP4.36□□□□□ -1.71
CSDE1-211ENST00000525970 KCNJ4P48050 445 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 CLCNKAP51800 687 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 KIAA1024LP59773 190 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 RUNX1T1Q06455 604 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 NPRL3Q12980 569 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 CBX3Q13185 183 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 TNK1Q13470 666 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 GPR18Q14330 331 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 SLC39A14Q15043 492 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 CTF1Q16619 201 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
CSDE1-211ENST00000525970 CCDC158Q5M9N0 1113 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 ERC1Q8IUD2 1116 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 SIAH3Q8IW03 269 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 CNPY4Q8N129 248 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 ANKRD13CQ8N6S4 541 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 AMER3Q8N944 861 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 MIGA1Q8NAN2 632 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 B4GALNT2Q8NHY0 566 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 MAGEC3Q8TD91 643 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 OIT3Q8WWZ8 545 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 MOB3AQ96BX8 217 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 TBC1D31Q96DN5 1066 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 BTBD10Q9BSF8 475 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 RBM38Q9H0Z9 239 aaKnown RBP4.36□□□□□ -1.71
CSDE1-211ENST00000525970 THAP9Q9H5L6 903 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 MINDY3Q9H8M7 445 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 Q9N2K0 584 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 PNPLA3Q9NST1 481 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 NPAP1Q9NZP6 1156 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 C1RLQ9NZP8 487 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 AKAP7Q9P0M2 348 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-211ENST00000525970 EPS15L1Q9UBC2 864 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 GRIP1Q9Y3R0 1128 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 LOXL2Q9Y4K0 774 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 PCDHAC2Q9Y5I4 1007 aa4.36□□□□□ -1.71
CSDE1-211ENST00000525970 CKAP5Q14008 2032 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 A0A1W2PPK0 400 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 RPS10-NUDT3A0A1W2PQS6 291 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 NEMP2A6NFY4 417 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 CAPN9O14815 690 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 EIF3DO15371 548 aaKnown RBP eCLIP4.35□□□□□ -1.71
CSDE1-211ENST00000525970 VEGFDO43915 354 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 FCGR3BO75015 233 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 NME6O75414 186 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-211ENST00000525970 IGHV2-70P01814 119 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 INHBAP08476 426 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 HMOX1P09601 288 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 P4HA1P13674 534 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 ITIH1P19827 911 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 SLC9A3P48764 834 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 FUT11Q495W5 492 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 GCNT6Q5T4J0 391 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 MFSD12Q6NUT3 480 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 WDR73Q6P4I2 378 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 TMPRSS11FQ6ZWK6 438 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 KCTD9Q7L273 389 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 TMPRSS11BQ86T26 416 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 GPR180Q86V85 440 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 DZIP1Q86YF9 867 aaKnown RBP4.35□□□□□ -1.71
CSDE1-211ENST00000525970 CLYBLQ8N0X4 340 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 C1orf52Q8N6N3 182 aaKnown RBP4.35□□□□□ -1.71
CSDE1-211ENST00000525970 ZNF611Q8N823 705 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 SMRP1Q8NCR6 262 aa4.35□□□□□ -1.71
CSDE1-211ENST00000525970 ASB5Q8WWX0 329 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms