RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 TRAPPC3O43617 180 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 NOL3O60936 208 aaKnown RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 TSPAN15O95858 294 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ANXA2P07355 339 aaKnown RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 MYZAPP0CAP1 466 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ALOX12P18054 663 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 TGM2P21980 687 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 HOXD13P35453 343 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 KRT2P35908 639 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ALDH1A3P47895 512 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 TPMTP51580 245 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 MAP3K7CLP57077 242 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 DEFA6Q01524 100 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ASPHQ12797 758 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 EFR3AQ14156 821 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ERV3-1Q14264 604 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 GALNT3Q14435 633 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CASP8Q14790 479 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 TSTQ16762 297 aaKnown RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 NADK2Q4G0N4 442 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 HLA-DQA1Q5Y7H0 255 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ATL3Q6DD88 541 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 MEX3BQ6ZN04 569 aaKnown RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 UNC13DQ70J99 1090 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 DSG4Q86SJ6 1040 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 VPS36Q86VN1 386 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 STX12Q86Y82 276 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 LRRC56Q8IYG6 542 aaPredicted RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ADGRF4Q8IZF3 695 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CADM3Q8N126 398 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 DNAAF3Q8N9W5 541 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 FAM71DQ8N9W8 422 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CCDC63Q8NA47 563 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ZMIZ2Q8NF64 920 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CALML6Q8TD86 181 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 ST8SIA4Q92187 359 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 SLC9A6Q92581 669 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 HSPH1Q92598 858 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 PPP1R13BQ96KQ4 1090 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 FCRL2Q96LA5 508 aaPredicted RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 TMEM47Q9BQJ4 181 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 SOX7Q9BT81 388 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 C9orf16Q9BUW7 83 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 PITHD1Q9GZP4 211 aaPredicted RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CPVLQ9H3G5 476 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 SYNDIG1Q9H7V2 258 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 GORASP2Q9H8Y8 452 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 NTN4Q9HB63 628 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 PDE7BQ9NP56 450 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 SLAMF7Q9NQ25 335 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CCDC177Q9NQR7 707 aaPredicted RBP4.38□□□□□ -1.71
CDKL3-209ENST00000523054 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 VANGL2Q9ULK5 521 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CTNND2Q9UQB3 1225 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 CAPN7Q9Y6W3 813 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 PLXNA2O75051 1894 aa4.38□□□□□ -1.71
CDKL3-209ENST00000523054 PRAMEF33A0A0G2JMD5 474 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 C1orf232A0A0U1RR37 186 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 HMX3A6NHT5 357 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 TMX2-CTNND1H3BSU7 103 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 PRPSAP2O60256 369 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CCNT1O60563 726 aaKnown RBP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 PRAMEF10O60809 474 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 ATP2C2O75185 946 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 LRCH4O75427 683 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CRLF1O75462 422 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 AMY1AP04745 511 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 SNHG28P0DPA3 235 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 LIFP15018 202 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 PRKACAP17612 351 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 TACR1P25103 407 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 ALDH3A1P30838 453 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CPA2P48052 419 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 BCAT1P54687 386 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CARD18P57730 90 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CSTF3Q12996 717 aaKnown RBP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 E2F2Q14209 437 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 KIR3DS1Q14943 382 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 EFTUD2Q15029 972 aaKnown RBP eCLIP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CEBPEQ15744 281 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 ZNF674Q2M3X9 581 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 FLYWCH1Q4VC44 716 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 TDRD12Q587J7 1177 aaKnown RBP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 HSP90AA4PQ58FG1 418 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 GRTP1Q5TC63 336 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 RPUSD3Q6P087 351 aaKnown RBP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CEP85Q6P2H3 762 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 FBXO38Q6PIJ6 1188 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 AKAP14Q86UN6 197 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 ZNF410Q86VK4 478 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 FAM90A1Q86YD7 464 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 ST13P4Q8IZP2 240 aaPredicted RBP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 C10orf53Q8N6V4 93 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 CDYL2Q8N8U2 506 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 ZNF397Q8NF99 534 aaPredicted RBP4.37□□□□□ -1.71
CDKL3-209ENST00000523054 OR4C6Q8NH72 309 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 SCAMP5Q8TAC9 235 aa4.37□□□□□ -1.71
CDKL3-209ENST00000523054 MYCBPAPQ8TBZ2 947 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms