RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 TRBV5-4A0A0C4DH59 114 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 DYTNA2CJ06 578 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 LOC730098B7Z3J9 87 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ARVCFO00192 962 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PRKD3O94806 890 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 KCNH1O95259 989 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ALBP02768 609 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PGRP06401 933 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 BPIP17213 487 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PFKLP17858 780 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CYP4F3Q08477 520 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TMED1Q13445 227 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 USP39Q53GS9 565 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PRR23BQ6ZRT6 265 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ANKS3Q6ZW76 656 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 SPARTQ8N0X7 666 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 NETO1Q8TDF5 533 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 MTFMTQ96DP5 389 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ITCHQ96J02 903 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CLSTN3Q9BQT9 956 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 APOL5Q9BWW9 433 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 YTHDF1Q9BYJ9 559 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PAIP1Q9H074 479 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 KAT8Q9H7Z6 458 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 EXD2Q9NVH0 621 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ADGRE2Q9UHX3 823 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TMEFF2Q9UIK5 374 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 DLGAP4Q9Y2H0 992 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PCDHB7Q9Y5E2 793 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TNPO3Q9Y5L0 923 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PLXNB3Q9ULL4 1909 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 A0A1W2PQ45 241 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 A0A1W2PQY0 241 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 G3V2T6 193 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 H0Y626 953 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TBL1XO60907 577 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TRIM16O95361 564 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 RPS3P23396 243 aaKnown RBP eCLIP8.28□□□□□ -1.089e-8■■■□□ 16.3
CTNNA1-210ENST00000518825 FSHRP23945 695 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 HNF1BP35680 557 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CSKP41240 450 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CDKN2CP42773 168 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TM4SF4P48230 202 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 MTA1Q13330 715 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 FAM98BQ52LJ0 330 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 INO80DQ53TQ3 878 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 SGO1Q5FBB7 561 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 LAIR1Q6GTX8 287 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 LRRC8DQ7L1W4 858 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TSPAN33Q86UF1 283 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CALHM3Q86XJ0 350 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CARNMT1Q8N4J0 409 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 BPIFB6Q8NFQ5 453 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 C2orf15Q8WU43 125 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 USP7Q93009 1102 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ACPTQ9BZG2 426 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 GPR63Q9BZJ6 419 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ABCG8Q9H221 673 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ELAC1Q9H777 363 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 INVSQ9Y283 1065 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PKP3Q9Y446 797 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 USP34Q70CQ2 3546 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PRAMEF4O60810 478 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PFDN1O60925 122 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 DEAF1O75398 565 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CST1P01037 141 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TACR1P25103 407 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ACRV1P26436 265 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 BMXP51813 675 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 RHOAP61586 193 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 B4GALNT1Q00973 533 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 SMARCB1Q12824 385 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 AQP6Q13520 282 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PON2Q15165 354 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PRAMEF9Q5VWM5 478 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 LHX8Q68G74 356 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 SLC16A12Q6ZSM3 486 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 STK40Q8N2I9 435 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ABTB1Q969K4 478 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 CNDP2Q96KP4 475 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 GLT1D1Q96MS3 346 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 TUBA1CQ9BQE3 449 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 INPP5KQ9BT40 448 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 THUMPD3Q9BV44 507 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PKD2L2Q9NZM6 624 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 KLQ9UEF7 1012 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 ZNF490Q9ULM2 529 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 PCDHB1Q9Y5F3 818 aa8.28□□□□□ -1.08
CTNNA1-210ENST00000518825 SCN5AQ14524 2016 aa8.27□□□□□ -1.08
CTNNA1-210ENST00000518825 C5orf42Q9H799 3197 aa8.27□□□□□ -1.08
CTNNA1-210ENST00000518825 MANBAO00462 879 aa8.27□□□□□ -1.09
CTNNA1-210ENST00000518825 COL6A1P12109 1028 aa8.27□□□□□ -1.09
CTNNA1-210ENST00000518825 BCKDHAP12694 445 aa8.27□□□□□ -1.09
CTNNA1-210ENST00000518825 PCMT1P22061 227 aa8.27□□□□□ -1.09
CTNNA1-210ENST00000518825 NRIP1P48552 1158 aa8.27□□□□□ -1.09
CTNNA1-210ENST00000518825 PLA2G16P53816 162 aa8.27□□□□□ -1.09
CTNNA1-210ENST00000518825 ISL1P61371 349 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms