RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 AGRPO00253 132 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 VEGFDO43915 354 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 SNX2O60749 519 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 NDST3O95803 873 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 MMP2P08253 660 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 INHBBP09529 407 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 FGF3P11487 239 aaPredicted RBP7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CCL4P13236 92 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 HALP42357 657 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 MAPK9P45984 424 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CLCNKAP51800 687 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 DYNLT1P63172 113 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CDK18Q07002 472 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 SLC10A2Q12908 348 aaPredicted RBP7.31□□□□□ -1.24
CCSER1-208ENST00000509109 NFATC2Q13469 925 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 INSCQ1MX18 579 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 NKAIN2Q5VXU1 208 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 ALS2CLQ60I27 953 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 IYDQ6PHW0 289 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CYP2R1Q6VVX0 501 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 VASH2Q86V25 355 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 LRRTM4Q86VH4 590 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CPNE8Q86YQ8 564 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 RBM12BQ8IXT5 1001 aaKnown RBP7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CACNA2D3Q8IZS8 1091 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CNTD1Q8N815 330 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 FAM169BQ8N8A8 192 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 OR6P1Q8NGX9 317 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 MZB1Q8WU39 189 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 TFB1MQ8WVM0 346 aaKnown RBP7.31□□□□□ -1.24
CCSER1-208ENST00000509109 KLHL6Q8WZ60 621 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 GLYATL1Q969I3 302 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 TTC25Q96NG3 672 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CATSPER2Q96P56 530 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 VPS35Q96QK1 796 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 SMIM14Q96QK8 99 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 TRIB3Q96RU7 358 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 VAT1Q99536 393 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 TIMM29Q9BSF4 260 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 OR2AG1Q9H205 316 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 TSPY26PQ9H489 355 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 TRIM39Q9HCM9 518 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 SPTLC3Q9NUV7 552 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCSER1-208ENST00000509109 HACD3Q9P035 362 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 PDP2Q9P2J9 529 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 CPNE7Q9UBL6 633 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 PLEKHM1Q9Y4G2 1056 aa7.31□□□□□ -1.24
CCSER1-208ENST00000509109 MN1Q10571 1320 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 HECTD1Q9ULT8 2610 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 C3orf70A6NLC5 250 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ZNF891A8MT65 544 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 PDZK1P1A8MUH7 402 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 AKR1B15C9JRZ8 316 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 CHUKO15111 745 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 TOX3O15405 576 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 SLC28A2O43868 658 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 RAD1O60671 282 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 PPFIA2O75334 1257 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 PMPCBO75439 489 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ZNF189O75820 626 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 IPO7O95373 1038 aaKnown RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 VIPP01282 170 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 EPOP01588 193 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ANKRD34CP0C6C1 535 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ZNF8P17098 575 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 BMP7P18075 431 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 IDSP22304 550 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 UGT1A3P35503 534 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 HADHBP55084 474 aaKnown RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 MC1RQ01726 317 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 IHHQ14623 411 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 PRKD1Q15139 912 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 SPA17Q15506 151 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 TEX44Q53QW1 395 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 TFDP3Q5H9I0 405 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ANKS6Q68DC2 871 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 BICRALQ6AI39 1079 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 KLHL35Q6PF15 583 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 BORAQ6PGQ7 559 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ZNF761Q86XN6 746 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 TRAPPC5Q8IUR0 188 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 CCDC50Q8IVM0 306 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 NLGN4XQ8N0W4 816 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 C19orf47Q8N9M1 422 aaKnown RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 NLGN4YQ8NFZ3 816 aaPredicted RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 GDAP1Q8TB36 358 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 BRSK1Q8TDC3 778 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 NCSTNQ92542 709 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 P3H4Q92791 437 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 EXTL1Q92935 676 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 LRRC45Q96CN5 670 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 ANAPC16Q96DE5 110 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 RBM41Q96IZ5 413 aaKnown RBP7.3□□□□□ -1.24
CCSER1-208ENST00000509109 TEKT5Q96M29 485 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 PPP1R2P1Q96PQ5 205 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 WDR24Q96S15 920 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 FSD1LQ9BXM9 530 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 SEMA4CQ9C0C4 833 aa7.3□□□□□ -1.24
CCSER1-208ENST00000509109 TGIF2Q9GZN2 237 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms