RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 PCID2Q5JVF3 399 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 PRAMEF17Q5VTA0 474 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 TTC27Q6P3X3 843 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 PRICKLE2Q7Z3G6 844 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 TRIM73Q86UV7 250 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 TMEM126BQ8IUX1 230 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 D2HGDHQ8N465 521 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 CT55Q8WUE5 264 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 RUFY1Q96T51 708 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 EFHD1Q9BUP0 239 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 AKIRIN1Q9H9L7 192 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 EIF2B3Q9NR50 452 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 RIMKLBQ9ULI2 386 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 ICKQ9UPZ9 632 aa14.37□□□□□ -0.11
UBE2D3-228ENST00000508974 SLC5A10A0PJK1 596 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 BHMG1C9JSJ3 638 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 CD3EAPO15446 510 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 ZIC2O95409 532 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 GSTM1P09488 218 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 CCR7P32248 378 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 CCR10P46092 362 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 POLE2P56282 527 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 TUBB4BP68371 445 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 GSTM4Q03013 218 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 GPS1Q13098 491 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 TUBB2AQ13885 445 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 ERV3-1Q14264 604 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 C4orf22Q6V702 233 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 VRK3Q8IV63 474 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 LMNTD1Q8N9Z9 388 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 CFAP61Q8NHU2 1237 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 ZNF501Q96CX3 271 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 FAM117AQ9C073 453 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 TFB2MQ9H5Q4 396 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 LHX9Q9NQ69 397 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 C1GALT1Q9NS00 363 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 ACTR10Q9NZ32 417 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 BFARQ9NZS9 450 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 TSR3Q9UJK0 312 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 PADI1Q9ULC6 663 aa14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 HEMK1Q9Y5R4 338 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-228ENST00000508974 PIPSLA2A3N6 862 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 CDC14CA4D256 554 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 GOLGA6L3A6NEY3 463 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 C2orf74A8MZ97 194 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 TMEM150CB9EJG8 249 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 GOLGA8KD6RF30 607 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 GOLGA8TH3BQL2 631 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 MATN2O00339 956 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 SLC28A2O43868 658 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 AVILO75366 819 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 MT-ND3P03897 115 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 FURINP09958 794 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 ACADLP28330 430 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 NPY2RP49146 381 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 RPS18P62269 152 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 KCNAB2Q13303 367 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 DNASE1L3Q13609 305 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 PTRHD1Q6GMV3 140 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 UNC5AQ6ZN44 842 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 TMEM135Q86UB9 458 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 MAGOHBQ96A72 148 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 MFSD3Q96ES6 412 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 IL22Q9GZX6 179 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 FANCEQ9HB96 536 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 SPHK1Q9NYA1 384 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 BTRCQ9Y297 605 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 PCDHB3Q9Y5E6 796 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 HELZ2Q9BYK8 2649 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 SPTBP11277 2137 aa14.35□□□□□ -0.11
UBE2D3-228ENST00000508974 TENM4Q6N022 2769 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TERTO14746 1132 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 CPNE3O75131 537 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 VAPBO95292 243 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 KRT14P02533 472 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TPBGLP0DKB5 382 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 UGT2B7P16662 529 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TPSB2P20231 275 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 SHMT2P34897 504 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 PPARGP37231 505 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 EIF3BP55884 814 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 MC1RQ01726 317 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 ABRQ12979 859 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 GPS2Q13227 327 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 DEFB110Q30KQ9 67 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 ANKRD22Q5VYY1 191 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 CASC4Q6P4E1 433 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 SPESP1Q6UW49 350 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 PTRH1Q86Y79 214 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 TBC1D21Q8IYX1 336 aa14.34□□□□□ -0.11
UBE2D3-228ENST00000508974 SLC35F6Q8N357 371 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms