RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MAGEA6P43360 314 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 NPY2RP49146 381 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 PRAMEP78395 509 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 CDK16Q00536 496 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 MC1RQ01726 317 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 PRKAA1Q13131 559 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 KRT33BQ14525 404 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TPSAB1Q15661 275 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 GPR19Q15760 415 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TUSC1Q2TAM9 212 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 FBXO38Q6PIJ6 1188 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 AMIGO1Q86WK6 493 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TBC1D21Q8IYX1 336 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 RASGEF1CQ8N431 466 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 PPHLN1Q8NEY8 458 aaKnown RBP8.8□□□□□ -1
PDLIM5-209ENST00000506632 OR5AR1Q8NGP9 310 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 OR6P1Q8NGX9 317 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 FLVCR1-AS1Q8TAF5 88 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 ELMO1Q92556 727 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 RNF31Q96EP0 1072 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 STAMBPL1Q96FJ0 436 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TTC1Q99614 292 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 CARD6Q9BX69 1037 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 AKIRIN1Q9H9L7 192 aaPredicted RBP8.8□□□□□ -1
PDLIM5-209ENST00000506632 LHX9Q9NQ69 397 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 CHRAC1Q9NRG0 131 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 KCND1Q9NSA2 647 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 HOMER3Q9NSC5 361 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 MARCH4Q9P2E8 410 aaPredicted RBP8.8□□□□□ -1
PDLIM5-209ENST00000506632 PADI1Q9ULC6 663 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 ICKQ9UPZ9 632 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 SEC16AO15027 2179 aa8.8□□□□□ -1
PDLIM5-209ENST00000506632 TCRBV7S3A2A0A539 114 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 GSAPA4D1B5 854 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SLC9B1P1A6NJY1 282 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 C2orf74A8MZ97 194 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 C21orf140B9A014 251 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 F8W8V4 182 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 AP3B1O00203 1094 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 CPNE3O75131 537 aaKnown RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 FURINP09958 794 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 PRKAR1AP10644 381 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 ST6GAL1P15907 406 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 TCN2P20062 427 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 CDH3P22223 829 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 NMBRP28336 390 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 CCR7P32248 378 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SHMT2P34897 504 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 PPARGP37231 505 aaPredicted RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 ARL4DP49703 201 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 POLE2P56282 527 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SESN2P58004 480 aaPredicted RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 CRADDP78560 199 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 BASP1P80723 227 aaKnown RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 NFATC3Q12968 1075 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 ABRQ12979 859 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 PRKG2Q13237 762 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 DNASE1L3Q13609 305 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 KCNJ11Q14654 390 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 BRD3Q15059 726 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 FASTKD1Q53R41 847 aaKnown RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 ZNF789Q5FWF6 425 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 AARS2Q5JTZ9 985 aaKnown RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 TMTC4Q5T4D3 741 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 ATP1A1-AS1Q5TC04 95 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 ARMC3Q5W041 872 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 TTC27Q6P3X3 843 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 LRRC8BQ6P9F7 803 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 NAPRTQ6XQN6 538 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 VRK3Q8IV63 474 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SLC22A15Q8IZD6 547 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 MPP5Q8N3R9 675 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SLC38A9Q8NBW4 561 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 OR5K2Q8NHB8 316 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 LKAAEAR1Q8TD35 194 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 CT55Q8WUE5 264 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 LRFN5Q96NI6 719 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 TRAPPC9Q96Q05 1148 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 MENTQ9BUN1 341 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 KIFC1Q9BW19 673 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 AP1M1Q9BXS5 423 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 IL22Q9GZX6 179 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SLC25A18Q9H1K4 315 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 P2RY12Q9H244 342 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 XKR8Q9H6D3 395 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 MRM3Q9HC36 420 aaKnown RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 SYTL2Q9HCH5 934 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 CATSPERZQ9NTU4 200 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SOHLH2Q9NX45 425 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 ACTR10Q9NZ32 417 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 BFARQ9NZS9 450 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 POLG2Q9UHN1 485 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 KCND3Q9UK17 655 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
PDLIM5-209ENST00000506632 ASF1AQ9Y294 204 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 NEU2Q9Y3R4 380 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 JRKLQ9Y4A0 524 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
PDLIM5-209ENST00000506632 SNRNP200O75643 2136 aaKnown RBP8.78□□□□□ -1
PDLIM5-209ENST00000506632 BSNQ9UPA5 3926 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms