RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PGAP3Q96FM1 320 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 LINC00615Q96LM1 132 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 SGK494Q96LW2 274 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 MYADMQ96S97 322 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 SERINC2Q96SA4 455 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 RTP3Q9BQQ7 232 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 RHNO1Q9BSD3 238 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 BTBD10Q9BSF8 475 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 VN1R1Q9GZP7 353 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 WNT5BQ9H1J7 359 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 PRMT7Q9NVM4 692 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 WDR35Q9P2L0 1181 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC7A7Q9UM01 511 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 GRIP1Q9Y3R0 1128 aa3.74□□□□□ -1.81
TOPBP1-204ENST00000505804 A0A1W2PPM1 405 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 TRBC2A0A5B9 178 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 UBE2CO00762 179 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 SP1P08047 785 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 LINGO3P0C6S8 592 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 MC5RP33032 325 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 HNRNPKP61978 463 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 HSPB3Q12988 150 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 CRY2Q49AN0 593 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 ZC2HC1CQ53FD0 456 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 SFMBT2Q5VUG0 894 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC35E4Q6ICL7 350 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 FAM198BQ6UWH4 519 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 CEACAM20Q6UY09 585 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 LINGO4Q6UY18 593 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 RBMS3Q6XE24 437 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 ZNF554Q86TJ5 538 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 TRPT1Q86TN4 253 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 TDRD5Q8NAT2 981 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 CCDC191Q8NCU4 936 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 PPFIBP2Q8ND30 876 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 FGFBP3Q8TAT2 258 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 TM9SF4Q92544 642 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 SLAMF9Q96A28 289 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 ZNF524Q96C55 264 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC47A1Q96FL8 570 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 ARRDC1-AS1Q9H2J1 176 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 NOL11Q9H8H0 719 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 CNOT10Q9H9A5 744 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 ECHDC1Q9NTX5 307 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 DPP3Q9NY33 737 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 BCCIPQ9P287 314 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 B3GAT1Q9P2W7 334 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 NRBP1Q9UHY1 535 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC24A2Q9UI40 661 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 OSGIN1Q9UJX0 560 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 MTUS1Q9ULD2 1270 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 PADI2Q9Y2J8 665 aa3.73□□□□□ -1.81
TOPBP1-204ENST00000505804 EDDM13A0A1B0GTR0 161 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 URADA6NGE7 173 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 PMS2P5A8MQ11 134 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 SMIM1B2RUZ4 78 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 GAPDHSO14556 408 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 SLC22A2O15244 555 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 GRID2O43424 1007 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 TIMM44O43615 452 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 DIAPH2O60879 1101 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 WDPCPO95876 746 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 IGKV3-20P01619 116 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 SMIM18P0DKX4 95 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 IGHV4-38-2P0DP08 117 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 CPT2P23786 658 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 ZNF75DP51815 510 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 CX3CL1P78423 397 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 LGALS3BPQ08380 585 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 RALGDSQ12967 914 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 KYNUQ16719 465 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 PHLDA2Q53GA4 152 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 KLHL26Q53HC5 615 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 DCAF10Q5QP82 559 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 TMPRSS11BQ86T26 416 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 ZNF329Q86UD4 541 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 IQCHQ86VS3 1027 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 CFAP206Q8IYR0 622 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 TRIML1Q8N9V2 468 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 OR10V1Q8NGI7 309 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 OR1J1Q8NGS3 322 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 IRGQQ8WZA9 623 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 HSD17B8Q92506 261 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 SENP5Q96HI0 755 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 SFXN2Q96NB2 322 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 S1PR5Q9H228 398 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 ANKZF1Q9H8Y5 726 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 A4GALTQ9NPC4 353 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 COQ3Q9NZJ6 369 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 NME7Q9Y5B8 376 aa3.72□□□□□ -1.81
TOPBP1-204ENST00000505804 PRR23AA6NEV1 266 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 FAM72CH0Y354 149 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 TBX10O75333 385 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 AMBPP02760 352 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 HSP90AA1P07900 732 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 MYBL1P10243 752 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 LIFP15018 202 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 ANOS1P23352 680 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 MPZP25189 248 aa3.71□□□□□ -1.82
TOPBP1-204ENST00000505804 PTPN3P26045 913 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms