RNA–Protein interactions for RNA: ENST00000497752.6

CD99-209, Transcript of CD99 molecule (Xg blood group), human

TSL 2

Gene CD99, Length 806 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD99-209	ENST00000497752	TMPRSS3	P57727	454 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	CXADR	P78310	365 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	SH3BP2	P78314	561 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	FOXM1	Q08050	763 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	VAC14	Q08AM6	782 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	DHX34	Q14147	1143 aa	Known RBP	10.75	□□□□□ -0.69
CD99-209	ENST00000497752	IL11RA	Q14626	422 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	TYSND1	Q2T9J0	566 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	PTRHD1	Q6GMV3	140 aa	Known RBP	10.75	□□□□□ -0.69
CD99-209	ENST00000497752	ARMC6	Q6NXE6	501 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	CEACAM20	Q6UY09	585 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.75	□□□□□ -0.69
CD99-209	ENST00000497752	GPR155	Q7Z3F1	870 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	PCGF5	Q86SE9	256 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	VRK3	Q8IV63	474 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	TBC1D21	Q8IYX1	336 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	SLC22A15	Q8IZD6	547 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	KRT222	Q8N1A0	295 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.75	□□□□□ -0.69
CD99-209	ENST00000497752	OR52E1	Q8NGJ3	308 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	LKAAEAR1	Q8TD35	194 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	SNRNP27	Q8WVK2	155 aa	Known RBP	10.75	□□□□□ -0.69
CD99-209	ENST00000497752	SLC41A2	Q96JW4	573 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	RUNDC3B	Q96NL0	473 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	BIRC8	Q96P09	236 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	CD180	Q99467	661 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	NRTN	Q99748	197 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	TSSK1B	Q9BXA7	367 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	ASIC3	Q9UHC3	531 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	PILRA	Q9UKJ1	303 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	ASF1A	Q9Y294	204 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	RPS6KL1	Q9Y6S9	549 aa		10.75	□□□□□ -0.69
CD99-209	ENST00000497752	ZFC3H1	O60293	1989 aa	Known RBP	10.75	□□□□□ -0.69
CD99-209	ENST00000497752	UBA6	A0AVT1	1052 aa	Predicted RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	TLCD2	A6NGC4	264 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	CCDC188	H7C350	402 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752		K7ENP7	123 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	BTN3A3	O00478	584 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	DNALI1	O14645	258 aa	Predicted RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	KPNA5	O15131	536 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	PFDN6	O15212	129 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	USP1	O94782	785 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	S1PR4	O95977	384 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	APOA4	P06727	396 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	TPBGL	P0DKB5	382 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	FOLR1	P15328	257 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	OGN	P20774	298 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	PRDX3	P30048	256 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	FMO4	P31512	558 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	KPNA2	P52292	529 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	ADAR	P55265	1226 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	ETF1	P62495	437 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	HSD11B2	P80365	405 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	DR1	Q01658	176 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	ABR	Q12979	859 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	PRKAA1	Q13131	559 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	SRSF6	Q13247	344 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	SYTL3	Q4VX76	610 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	DNAJC21	Q5F1R6	531 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	RNF187	Q5TA31	235 aa	Predicted RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	ARHGAP40	Q5TG30	622 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	INO80C	Q6PI98	192 aa	Predicted RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	CCDC81	Q6ZN84	652 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	CENPU	Q71F23	418 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	HOOK3	Q86VS8	718 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	AMIGO1	Q86WK6	493 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	KMT5C	Q86Y97	462 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	CILP2	Q8IUL8	1156 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	CARF	Q8N187	725 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	OTUD6B	Q8N6M0	293 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	OR5AR1	Q8NGP9	310 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	OR5K2	Q8NHB8	316 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	LPGAT1	Q92604	370 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	NKD1	Q969G9	470 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	ZNF669	Q96BR6	464 aa	Predicted RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	PPM1M	Q96MI6	270 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	PANX3	Q96QZ0	392 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	OR6C1	Q96RD1	312 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	HGH1	Q9BTY7	390 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	TRIT1	Q9H3H1	467 aa	Known RBP	10.74	□□□□□ -0.69
CD99-209	ENST00000497752	XKR8	Q9H6D3	395 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	IL1RAPL1	Q9NZN1	696 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	POLG2	Q9UHN1	485 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	GNPTG	Q9UJJ9	305 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	CRYL1	Q9Y2S2	319 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752	MAD1L1	Q9Y6D9	718 aa		10.74	□□□□□ -0.69
CD99-209	ENST00000497752		H3BMM5	538 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	MATN2	O00339	956 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	BTN3A1	O00481	513 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	STK17B	O94768	372 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	ZBTB11	O95625	1053 aa	Predicted RBP	10.73	□□□□□ -0.69
CD99-209	ENST00000497752	ESR1	P03372	595 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	FGF5	P12034	268 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	EIF3B	P55884	814 aa	Known RBP	10.73	□□□□□ -0.69
CD99-209	ENST00000497752	THOC5	Q13769	683 aa	Known RBP	10.73	□□□□□ -0.69
CD99-209	ENST00000497752	KCNAB1	Q14722	419 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	LONRF1	Q17RB8	773 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	MSS51	Q4VC12	460 aa		10.73	□□□□□ -0.69
CD99-209	ENST00000497752	CTSL3P	Q5NE16	218 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms