RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 KCNAB2Q13303 367 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 DNASE1L3Q13609 305 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 PCID2Q5JVF3 399 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 ZNF449Q6P9G9 518 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 NAPRTQ6XQN6 538 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 AMIGO1Q86WK6 493 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 PRELID2Q8N945 189 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 TRIM58Q8NG06 486 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 OR5AR1Q8NGP9 310 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 RUFY1Q96T51 708 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 TREX1Q9NSU2 369 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 MARCH4Q9P2E8 410 aaPredicted RBP12□□□□□ -0.49
CLDN12-213ENST00000496677 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
CLDN12-213ENST00000496677 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 C21orf140B9A014 251 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 H3BMH7 237 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 CEP104O60308 925 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 CREG1O75629 220 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 CDH3P22223 829 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 CXCR5P32302 372 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 NPY2RP49146 381 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 ARL4DP49703 201 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 CRADDP78560 199 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 NFKB2Q00653 900 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 PLOD1Q02809 727 aaPredicted RBP11.99□□□□□ -0.49
CLDN12-213ENST00000496677 PRKAA1Q13131 559 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 GPS2Q13227 327 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 BRD3Q15059 726 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 KCTD19Q17RG1 926 aaPredicted RBP11.99□□□□□ -0.49
CLDN12-213ENST00000496677 DEFB109BQ30KR1 87 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 PRAMEF17Q5VTA0 474 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 C16orf46Q6P387 395 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 FAM199XQ6PEV8 388 aaPredicted RBP11.99□□□□□ -0.49
CLDN12-213ENST00000496677 UNC5AQ6ZN44 842 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 TBC1D21Q8IYX1 336 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 SLC22A15Q8IZD6 547 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 OR6P1Q8NGX9 317 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 OR1L3Q8NH93 324 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 APOBEC4Q8WW27 367 aaKnown RBP11.99□□□□□ -0.49
CLDN12-213ENST00000496677 MAIP1Q8WWC4 291 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 ELMO1Q92556 727 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 LRFN5Q96NI6 719 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 OR2A14Q96R47 310 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 HGH1Q9BTY7 390 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 CARD6Q9BX69 1037 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 AP1M1Q9BXS5 423 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 SYTL2Q9HCH5 934 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 SPHK1Q9NYA1 384 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 ACTR10Q9NZ32 417 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 KCND3Q9UK17 655 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 KCNMB2Q9Y691 235 aa11.99□□□□□ -0.49
CLDN12-213ENST00000496677 GSAPA4D1B5 854 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 IQCF5A8MTL0 148 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 C2orf74A8MZ97 194 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 SLC28A2O43868 658 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 KATNA1O75449 491 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 SCRG1O75711 98 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 SLCO2B1O94956 709 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 ZIC2O95409 532 aaPredicted RBP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 CAPN1P07384 714 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 OR56A5P0C7T3 313 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 PVRP15151 417 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 ARNTP27540 789 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 AOAHP28039 575 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 NMBRP28336 390 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 RORAP35398 523 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 MAGEA6P43360 314 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 GABRA4P48169 554 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 SESN2P58004 480 aaPredicted RBP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 CDK16Q00536 496 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 ABRQ12979 859 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 ERV3-1Q14264 604 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 ZIC1Q15915 447 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 FASTKD1Q53R41 847 aaKnown RBP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 TMTC4Q5T4D3 741 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 LCN10Q6JVE6 187 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 SPESP1Q6UW49 350 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 LDB1Q86U70 411 aaPredicted RBP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 TMEM135Q86UB9 458 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 VRK3Q8IV63 474 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 RASGEF1CQ8N431 466 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 PPHLN1Q8NEY8 458 aaKnown RBP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 OR5K2Q8NHB8 316 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLDN12-213ENST00000496677 MENTQ9BUN1 341 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 KIFC1Q9BW19 673 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 GPR87Q9BY21 358 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 CHRNA10Q9GZZ6 450 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 P2RY12Q9H244 342 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 FAM60AQ9NP50 221 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 HOMER3Q9NSC5 361 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 POLG2Q9UHN1 485 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 ASF1AQ9Y294 204 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 SEC16AO15027 2179 aa11.98□□□□□ -0.49
CLDN12-213ENST00000496677 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.97□□□□□ -0.49
CLDN12-213ENST00000496677 CD3EAPO15446 510 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms