RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 SEMA5AQ13591 1074 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 BOP1Q14137 746 aaKnown RBP12.56□□□□□ -0.4
FN1-226ENST00000496542 BRD3Q15059 726 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 SYTL3Q4VX76 610 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 SEL1L2Q5TEA6 688 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 CPZQ66K79 652 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 ASB18Q6ZVZ8 466 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 SYVN1Q86TM6 617 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 LINC00523Q86TU6 105 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 AMIGO1Q86WK6 493 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 DNAAF3Q8N9W5 541 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 TEX19Q8NA77 164 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 OR5AR1Q8NGP9 310 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 OR1L3Q8NH93 324 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 SEC14L1Q92503 715 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 ELMO1Q92556 727 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.56□□□□□ -0.4
FN1-226ENST00000496542 CLIP3Q96DZ5 547 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 HES6Q96HZ4 224 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 TRIM55Q9BYV6 548 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 PITPNM3Q9BZ71 974 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 TFB2MQ9H5Q4 396 aaKnown RBP12.56□□□□□ -0.4
FN1-226ENST00000496542 ACTR10Q9NZ32 417 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 FARSAQ9Y285 508 aaKnown RBP12.56□□□□□ -0.4
FN1-226ENST00000496542 ARGFXA6NJG6 315 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 C2orf74A8MZ97 194 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 MEN1O00255 615 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
FN1-226ENST00000496542 GAS8O95995 478 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 FTH1P02794 183 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 FOXN2P32314 431 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 NSG1P42857 185 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 CDH17Q12864 832 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 LAMB3Q13751 1172 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 ITIH4Q14624 930 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 PLEKHS1Q5SXH7 462 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 LCN10Q6JVE6 187 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 NAPRTQ6XQN6 538 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 PPP1R21Q6ZMI0 780 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 TRIM73Q86UV7 250 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 APLFQ8IW19 511 aaPredicted RBP12.55□□□□□ -0.4
FN1-226ENST00000496542 ADGRF3Q8IZF5 1079 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 DSELQ8IZU8 1212 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 ENDOVQ8N8Q3 282 aaKnown RBP12.55□□□□□ -0.4
FN1-226ENST00000496542 THAP4Q8WY91 577 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 TRAPPC9Q96Q05 1148 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 ACTR5Q9H9F9 607 aaPredicted RBP12.55□□□□□ -0.4
FN1-226ENST00000496542 ETNK1Q9HBU6 452 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 SYTL2Q9HCH5 934 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 ICKQ9UPZ9 632 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 PLAAQ9Y263 795 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 ASF1AQ9Y294 204 aa12.55□□□□□ -0.4
FN1-226ENST00000496542 CCDC88CQ9P219 2028 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 SPENQ96T58 3664 aaKnown RBP12.54□□□□□ -0.4
FN1-226ENST00000496542 HEATR9A2RTY3 570 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 ERI2A8K979 691 aaKnown RBP12.54□□□□□ -0.4
FN1-226ENST00000496542 E7EVH7 732 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 QSOX1O00391 747 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 LIASO43766 372 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 PDGFAP04085 211 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 RORAP35398 523 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 PTGIRP43119 386 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
FN1-226ENST00000496542 ITGA1P56199 1179 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 SNX1Q13596 522 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 ZNF789Q5FWF6 425 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 FAM69BQ5VUD6 431 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 ZNF517Q6ZMY9 492 aaPredicted RBP12.54□□□□□ -0.4
FN1-226ENST00000496542 CDHR3Q6ZTQ4 885 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 SYTL1Q8IYJ3 562 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 OR13J1Q8NGT2 312 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 C1orf54Q8WWF1 131 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 N4BP2L2Q92802 583 aaPredicted RBP12.54□□□□□ -0.4
FN1-226ENST00000496542 HDAC10Q969S8 669 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 LRFN5Q96NI6 719 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 ACSS2Q9NR19 701 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 PCMTD2Q9NV79 361 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 SLC2A6Q9UGQ3 507 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 PLAGL1Q9UM63 463 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 ZNF148Q9UQR1 794 aa12.54□□□□□ -0.4
FN1-226ENST00000496542 TDRKHQ9Y2W6 561 aaKnown RBP12.54□□□□□ -0.4
FN1-226ENST00000496542 E7EQ34 232 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 OR1I1O60431 355 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 GOT2P00505 430 aaKnown RBP12.53□□□□□ -0.4
FN1-226ENST00000496542 RAB40ALP0C0E4 278 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 ETS1P14921 441 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 UGT2B7P16662 529 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 PSMA3P25788 255 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 CDC25BP30305 580 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms