RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 DYRK4Q9NR20 520 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 RMND1Q9NWS8 449 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 NLGN3Q9NZ94 848 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 VSX1Q9NZR4 365 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 MPP6Q9NZW5 540 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 GRHPRQ9UBQ7 328 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 KCNE5Q9UJ90 142 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SLC39A10Q9ULF5 831 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 MAN2B2Q9Y2E5 1009 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 TBC1D30Q9Y2I9 924 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 HS3ST4Q9Y661 456 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 HS3ST3A1Q9Y663 406 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 NBASA2RRP1 2371 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 NYNRINQ9P2P1 1898 aaKnown RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 DOPEY2Q9Y3R5 2298 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SPTY2D1-AS1A0A0U1RR47 76 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 FAM234BA2RU67 622 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 IGLON5A6NGN9 336 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 LGALS16A8MUM7 142 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 I6L893 689 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 M0QYT0 321 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SYT5O00445 386 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 AREL1O15033 823 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ALOX15BO15296 676 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 MED7O43513 233 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SLC28A2O43868 658 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CLDN11O75508 207 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF821O75541 412 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SKAP2O75563 359 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GCATO75600 419 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 TNFSF15O95150 251 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SMC2O95347 1197 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 NDST3O95803 873 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GPANK1O95872 356 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CSF2P04141 144 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GP1BAP07359 652 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 RHOCP08134 193 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GABRB3P28472 473 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GKP32189 559 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 UCNP55089 124 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CDH4P55283 916 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 HNRNPKP61978 463 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 KRT83P78385 493 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GCNT1Q02742 428 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 OCA2Q04671 838 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 LRRC63Q05C16 580 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CCDC15Q0P6D6 951 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SGCGQ13326 291 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 PDCLQ13371 301 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 PDE1CQ14123 709 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 BOP1Q14137 746 aaKnown RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ZSCAN23Q3MJ62 389 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 EFHC1Q5JVL4 640 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 NEK5Q6P3R8 708 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 GUSBP11Q6P575 273 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 TFAP2DQ7Z6R9 452 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ABI3BPQ7Z7G0 1075 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 EXD3Q8N9H8 876 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF548Q8NEK5 533 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 IL17DQ8TAD2 202 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 NELFBQ8WX92 580 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 EXTL1Q92935 676 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 MED8Q96G25 268 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 WBP1Q96G27 269 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 PRR11Q96HE9 360 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CCDC34Q96HJ3 373 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 DHTKD1Q96HY7 919 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 IL12RB2Q99665 862 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 TRIM62Q9BVG3 475 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 INTS2Q9H0H0 1204 aaKnown RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 TKTL2Q9H0I9 626 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 MYLK2Q9H1R3 596 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 TCEAL2Q9H3H9 227 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CLMPQ9H6B4 373 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 SYNDIG1Q9H7V2 258 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 THSD1Q9NS62 852 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 PIGVQ9NUD9 493 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ETAA1Q9NY74 926 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 XPR1Q9UBH6 696 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 IL36AQ9UHA7 158 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 VPS51Q9UID3 782 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 MID2Q9UJV3 735 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 CNTN6Q9UQ52 1028 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 HS3ST2Q9Y278 367 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 ENTPD2Q9Y5L3 495 aa5.2□□□□□ -1.58
PTCD3-219ENST00000494323 EME2A4GXA9 379 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 GOLGA6L4A6NEF3 574 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 AQP12BA6NM10 295 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 C16orf96A6NNT2 1141 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 BECN2A8MW95 431 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 E7ENX8 843 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 K7ENP7 123 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 PSMA7O14818 248 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 YY2O15391 372 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 P4HA2O15460 535 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 AQP9O43315 295 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 AKAP8O43823 692 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 FAM20BO75063 409 aa5.19□□□□□ -1.58
PTCD3-219ENST00000494323 ERN1O75460 977 aaKnown RBP5.19□□□□□ -1.58
PTCD3-219ENST00000494323 PEX11BO96011 259 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms