RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 HEATR9A2RTY3 570 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 GOLGA6L6A8MZA4 724 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 K7EM74 188 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 IFRD1O00458 451 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 SUV39H1O43463 412 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 HCRTR1O43613 425 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 AP2A2O94973 939 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ZBTB11O95625 1053 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 FGGP02679 453 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CTSBP07858 339 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 NR1D1P20393 614 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CDH3P22223 829 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ADRA1DP25100 572 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CCR7P32248 378 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 NSG1P42857 185 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CCR10P46092 362 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 SESN2P58004 480 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ACVR1Q04771 509 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 GPS2Q13227 327 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 DNASE1L3Q13609 305 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 BOP1Q14137 746 aaKnown RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ITIH4Q14624 930 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CCNG2Q16589 344 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ZNF789Q5FWF6 425 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CES3Q6UWW8 571 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 PACS1Q6VY07 963 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 UNC5AQ6ZN44 842 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 AMIGO1Q86WK6 493 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 KMT5CQ86Y97 462 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 VRK3Q8IV63 474 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 FAM20CQ8IXL6 584 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ADGRF3Q8IZF5 1079 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 KRT222Q8N1A0 295 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CCDC89Q8N998 374 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 OR6P1Q8NGX9 317 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 OR4L1Q8NH43 312 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CATSPER2Q96P56 530 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 RANBP9Q96S59 729 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 EFHD1Q9BUP0 239 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 TFB2MQ9H5Q4 396 aaKnown RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 C1GALT1Q9NS00 363 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 KCND1Q9NSA2 647 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 SOHLH2Q9NX45 425 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 SPHK1Q9NYA1 384 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ACTR10Q9NZ32 417 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 PAK5Q9P286 719 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 MARCH4Q9P2E8 410 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 CIDEBQ9UHD4 219 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 ICKQ9UPZ9 632 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 BTRCQ9Y297 605 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 TCAF1Q9Y4C2 921 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 HEMK1Q9Y5R4 338 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-219ENST00000494069 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
LRCH3-219ENST00000494069 PIPSLA2A3N6 862 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CDC14CA4D256 554 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ERI2A8K979 691 aaKnown RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 LIN7AO14910 233 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CEP104O60308 925 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CREG1O75629 220 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 SCRG1O75711 98 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 GAS8O95995 478 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 FTH1P02794 183 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CCDC175P0C221 793 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 NMBRP28336 390 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CD151P48509 253 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TUBB4BP68371 445 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 PRKAA1Q13131 559 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 RPA4Q13156 261 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 LAMB3Q13751 1172 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TRIP13Q15645 432 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ZIC1Q15915 447 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 PLEKHS1Q5SXH7 462 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 AFTPHQ6ULP2 937 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ZNF662Q6ZS27 426 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TMEM126BQ8IUX1 230 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 PRELID2Q8N945 189 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 OR1L3Q8NH93 324 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 FLVCR1-AS1Q8TAF5 88 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 APOBEC4Q8WW27 367 aaKnown RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 MR1Q95460 341 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ABHD17AQ96GS6 310 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TRAPPC9Q96Q05 1148 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 PITPNM3Q9BZ71 974 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CHST8Q9H2A9 424 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ADNPQ9H2P0 1102 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ACTL8Q9H568 366 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 MVB12BQ9H7P6 319 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 VPS37BQ9H9H4 285 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 FAM60AQ9NP50 221 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 RIMKLBQ9ULI2 386 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TTC7AQ9ULT0 858 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 CDYLQ9Y232 598 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 ASF1AQ9Y294 204 aa8.27□□□□□ -1.09
LRCH3-219ENST00000494069 DRG1Q9Y295 367 aaKnown RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 TDRKHQ9Y2W6 561 aaKnown RBP8.27□□□□□ -1.09
LRCH3-219ENST00000494069 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms