RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CREMQ03060 361 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 PWP1Q13610 501 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 PTPRCAPQ14761 206 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 ARHGEF6Q15052 776 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 GPR162Q16538 588 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 INTS6LQ5JSJ4 861 aaKnown RBP11.49□□□□□ -0.57
HDAC4-210ENST00000493582 PRR23CQ6ZRP0 262 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 Q6ZSR9 355 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 HIPK1Q86Z02 1210 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 CRYBG2Q8N1P7 616 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 FAM109AQ8N4B1 249 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 FBXO39Q8N4B4 442 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 TTC29Q8NA56 475 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-210ENST00000493582 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-210ENST00000493582 NETO1Q8TDF5 533 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 TRNT1Q96Q11 434 aaKnown RBP11.49□□□□□ -0.57
HDAC4-210ENST00000493582 BBS2Q9BXC9 721 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 WDCPQ9H6R7 721 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 RBM22Q9NW64 420 aaKnown RBP eCLIP11.49□□□□□ -0.573e-6■■■□□ 17.4
HDAC4-210ENST00000493582 UBA2Q9UBT2 640 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-210ENST00000493582 MUTYHQ9UIF7 546 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 GJD2Q9UKL4 321 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 IKZF3Q9UKT9 509 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 PEX16Q9Y5Y5 336 aa11.49□□□□□ -0.57
HDAC4-210ENST00000493582 COL1A2P08123 1366 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 PCDHGA12O60330 932 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 WBP4O75554 376 aaKnown RBP11.48□□□□□ -0.57
HDAC4-210ENST00000493582 HCAR3P49019 387 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 XKR7Q5GH72 579 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 ZMAT1Q5H9K5 638 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 CPZQ66K79 652 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 ANKS6Q68DC2 871 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 METTL7BQ6UX53 244 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 GCNT7Q6ZNI0 430 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 DNASE1L2Q92874 299 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 C8orf37Q96NL8 207 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 COLEC11Q9BWP8 271 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 RAPGEFL1Q9UHV5 662 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 LYVE1Q9Y5Y7 322 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 POLR1CO15160 346 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-210ENST00000493582 SNX4O95219 450 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 SERPINF2P08697 491 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 AZGP1P25311 298 aaKnown RBP11.48□□□□□ -0.57
HDAC4-210ENST00000493582 CA5AP35218 305 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 GEMP55040 296 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 WNT3AP56704 352 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 MAP3K7CLP57077 242 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 CYP4F2P78329 520 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 DAB2P98082 770 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 CYP4F3Q08477 520 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 TAB1Q15750 504 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 RBBP7Q16576 425 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 CYP4Z2PQ8N1L4 340 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 PGBD5Q8N414 524 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 ATPAF2Q8N5M1 289 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 APOL4Q9BPW4 351 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 COPS4Q9BT78 406 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 PRKD2Q9BZL6 878 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 ULBP1Q9BZM6 244 aa11.48□□□□□ -0.57
HDAC4-210ENST00000493582 FAM124BQ9H5Z6 455 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-210ENST00000493582 RABL2AQ9UBK7 228 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-210ENST00000493582 UTRNP46939 3433 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 HMX3A6NHT5 357 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 SCO1O75880 301 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 OR4F21O95013 312 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 MAGEA11P43364 429 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 GTDC1Q4AE62 458 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CCDC190Q86UF4 302 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 TRIM48Q8IWZ4 208 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 TTC16Q8NEE8 873 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 NTAN1Q96AB6 310 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 OMA1Q96E52 524 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CEP19Q96LK0 163 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CCDC115Q96NT0 180 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 SLC2A13Q96QE2 648 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 SLC9A7Q96T83 725 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 GPR20Q99678 358 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CCNB1IP1Q9NPC3 277 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 DCAF13Q9NV06 445 aaKnown RBP11.47□□□□□ -0.57
HDAC4-210ENST00000493582 COQ3Q9NZJ6 369 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 RNF112Q9ULX5 631 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 AKT3Q9Y243 479 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 KLHL20Q9Y2M5 609 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 OR6C70A6NIJ9 312 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 ANKRD28O15084 1053 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CREG1O75629 220 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 RPLP0P05388 317 aaKnown RBP11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CAPN1P07384 714 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 PTPRAP18433 802 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 CHRNA5P30532 468 aa11.47□□□□□ -0.57
HDAC4-210ENST00000493582 BACE1P56817 501 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms