RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 FAM198BQ6UWH4 519 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 CES3Q6UWW8 571 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 UNC5AQ6ZN44 842 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 ASB18Q6ZVZ8 466 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 RBM12BQ8IXT5 1001 aaKnown RBP8.63□□□□□ -1.03
HDAC3-211ENST00000491581 SHISA5Q8N114 240 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 ACVR1CQ8NER5 493 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 ELMO1Q92556 727 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 TFGQ92734 400 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-211ENST00000491581 HDAC10Q969S8 669 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 FAM136AQ96C01 138 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 CLIP3Q96DZ5 547 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 HES6Q96HZ4 224 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 CATSPER2Q96P56 530 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 TRAPPC9Q96Q05 1148 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 TRIT1Q9H3H1 467 aaKnown RBP8.63□□□□□ -1.03
HDAC3-211ENST00000491581 KCND1Q9NSA2 647 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 ACTR10Q9NZ32 417 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 STOX2Q9P2F5 926 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-211ENST00000491581 ACSL5Q9ULC5 683 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 GUCA1BQ9UMX6 200 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 POLHQ9Y253 713 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 EFR3BQ9Y2G0 817 aa8.63□□□□□ -1.03
HDAC3-211ENST00000491581 DNMT3AQ9Y6K1 912 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-211ENST00000491581 COL12A1Q99715 3063 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 TCRBV7S3A2A0A539 114 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 MROH6A6NGR9 719 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 GOLGA8KD6RF30 607 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 GOLGA8TH3BQL2 631 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 MEN1O00255 615 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ZNF185O15231 689 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ZNF749O43361 778 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 LIASO43766 372 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 KCNJ13O60928 360 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 STK10O94804 968 aaKnown RBP8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ZBTB11O95625 1053 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-211ENST00000491581 UGT2B7P16662 529 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 MCM3P25205 808 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ACADLP28330 430 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 CCR7P32248 378 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 RORAP35398 523 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 KCNJ1P48048 391 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 GABRA4P48169 554 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 CD97P48960 835 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 PMS2P54278 862 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 TUBB4BP68371 445 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 SEMA5AQ13591 1074 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 TUBB2AQ13885 445 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 AMIGO1Q86WK6 493 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 DSELQ8IZU8 1212 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ZBTB2Q8N680 514 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 METTL27Q8N6F8 245 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-211ENST00000491581 CFAP61Q8NHU2 1237 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ADAMTS17Q8TE56 1095 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-211ENST00000491581 OR2A14Q96R47 310 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 ANP32EQ9BTT0 268 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 TUBB2BQ9BVA1 445 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 NUDT9Q9BW91 350 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 SYNPO2LQ9H987 977 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 IL1RAPL1Q9NZN1 696 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 GALPQ9UBC7 116 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 DHCR7Q9UBM7 475 aaKnown RBP8.62□□□□□ -1.03
HDAC3-211ENST00000491581 KCND3Q9UK17 655 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 CDYLQ9Y232 598 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 FARSAQ9Y285 508 aaKnown RBP8.62□□□□□ -1.03
HDAC3-211ENST00000491581 BTRCQ9Y297 605 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 PCDHGA6Q9Y5G7 932 aa8.62□□□□□ -1.03
HDAC3-211ENST00000491581 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 SLC5A10A0PJK1 596 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 H3BMH7 237 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 H7C0S8 307 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 KRT86O43790 486 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 RFPL1O75677 317 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 MED26O95402 600 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 RALBP11234 206 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 SFTPCP11686 197 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ITGAXP20702 1163 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 GNLYP22749 145 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 PSMB5P28074 263 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 NMBRP28336 390 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 OTX2P32243 289 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 CXCR5P32302 372 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 RPL22P35268 128 aaKnown RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 HADHAP40939 763 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 GRIA3P42263 894 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 SESN2P58004 480 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ACY1Q03154 408 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 CACNG1Q06432 222 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 KIF5AQ12840 1032 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ATP1A4Q13733 1029 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 GRB7Q14451 532 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 TRIP13Q15645 432 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 UGT8Q16880 541 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 TSTD2Q5T7W7 516 aa8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ZNF385CQ66K41 422 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-211ENST00000491581 ZNF517Q6ZMY9 492 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms