RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 BEND5Q7L4P6 421 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 DPP9Q86TI2 863 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 LSMEM2Q8N112 164 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC37A3Q8NCC5 494 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 C2CD4AQ8NCU7 369 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ZNF431Q8TF32 576 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 RPL3LQ92901 407 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 KCNC2Q96PR1 638 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SMAD5Q99717 465 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 MRPL9Q9BYD2 267 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 UCK2Q9BZX2 261 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 POLR1EQ9GZS1 481 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ABCG8Q9H221 673 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SDR39U1Q9NRG7 319 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 TMPRSS4Q9NRS4 437 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 PHF11Q9UIL8 331 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SPO11Q9Y5K1 396 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 HMX3A6NHT5 357 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 RAMP2O60895 175 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 CNTN5O94779 1100 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 DIRAS1O95057 198 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 PRAMEF1O95521 474 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 EPB42P16452 691 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ADARB1P78563 741 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 CPSF6Q16630 551 aaKnown RBP eCLIP11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 UNC50Q53HI1 259 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 TREML2Q5T2D2 321 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 CLEC14AQ86T13 490 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 PIM3Q86V86 326 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 HS3ST5Q8IZT8 346 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 PARP16Q8N5Y8 322 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 OR52J3Q8NH60 311 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC35F5Q8WV83 523 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 GPR21Q99679 349 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 DOK1Q99704 481 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 AIG1Q9NVV5 245 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 HSPE1-MOB4S4R3N1 261 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 NUP98P52948 1817 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 ROBO1Q9Y6N7 1651 aa11.1□□□□□ -0.63
CRNKL1-204ENST00000490910 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 DLGAP1O14490 977 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 GSTM1P09488 218 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 SCNN1AP37088 669 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 LHX1P48742 406 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 OAZ1P54368 228 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 EMX2Q04743 252 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 GRIK2Q13002 908 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 TRIM71Q2Q1W2 868 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ADPRMQ3LIE5 342 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 IRAK1BP1Q5VVH5 260 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 SLC27A1Q6PCB7 646 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 BTLAQ7Z6A9 289 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 TMEM192Q8IY95 271 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 DUS3LQ96G46 650 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ASPNQ9BXN1 380 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 POLR2J2Q9GZM3 115 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 MUC3BQ9H195 1237 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 TTYH1Q9H313 450 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 TLR8Q9NR97 1041 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 COMMD3Q9UBI1 195 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 MRPS7Q9Y2R9 242 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 TIMM13Q9Y5L4 95 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 KIF13AQ9H1H9 1805 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ADAMDEC1O15204 470 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 KIAA0513O60268 411 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ARF4P18085 180 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 WARSP23381 471 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 CRATP43155 626 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 FKBP1AP62942 108 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 DTWD1Q8N5C7 304 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 CELF2-AS1Q8N7Q2 184 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ACVR1CQ8NER5 493 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 OR10T2Q8NGX3 314 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 SEMA3CQ99985 751 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 DPEP3Q9H4B8 488 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 SMURF1Q9HCE7 757 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 TM9SF3Q9HD45 589 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 KPNA6O60684 536 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 G6PDP11413 515 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 DCTP40126 519 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 BCL7AQ4VC05 210 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 CES5AQ6NT32 575 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 AFTPHQ6ULP2 937 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ENPP6Q6UWR7 440 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 LIX1Q8N485 282 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 RACGAP1Q9H0H5 632 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 AKIP1Q9NQ31 210 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 GALPQ9UBC7 116 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 RECQL4O94761 1208 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 CHRM5P08912 532 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 IL32P24001 234 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 CA5AP35218 305 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms