RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CSE1LP55060 971 aaKnown RBP11.11□□□□□ -0.63
SPEN-205ENST00000487496 TUBB4BP68371 445 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 KCNJ11Q14654 390 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 CYP1B1Q16678 543 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 SYTL3Q4VX76 610 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 TMTC4Q5T4D3 741 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 CES3Q6UWW8 571 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 TBC1D21Q8IYX1 336 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 ADGRF3Q8IZF5 1079 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 LKAAEAR1Q8TD35 194 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 COG1Q8WTW3 980 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 STARD8Q92502 1023 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 ZNF501Q96CX3 271 aaPredicted RBP11.11□□□□□ -0.63
SPEN-205ENST00000487496 MFSD3Q96ES6 412 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 OSBPL9Q96SU4 736 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 PITPNM3Q9BZ71 974 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 MRM3Q9HC36 420 aaKnown RBP11.11□□□□□ -0.63
SPEN-205ENST00000487496 SOHLH2Q9NX45 425 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 SOX13Q9UN79 622 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 ICKQ9UPZ9 632 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 CDYLQ9Y232 598 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 NEU2Q9Y3R4 380 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 PIKFYVEQ9Y2I7 2098 aa11.11□□□□□ -0.63
SPEN-205ENST00000487496 C2orf74A8MZ97 194 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 PGRMC1O00264 195 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 KIF5CO60282 957 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 GPC4O75487 556 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 VAPBO95292 243 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 MT-ND3P03897 115 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 FAM87AP0C7U9 286 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 TPBGLP0DKB5 382 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 ST6GAL1P15907 406 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 SHMT2P34897 504 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 SARNPP82979 210 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 HSPA14Q0VDF9 509 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 GPR19Q15760 415 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 ANKRD22Q5VYY1 191 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 BORAQ6PGQ7 559 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 CCDC137Q6PK04 289 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 UNC5AQ6ZN44 842 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 CAND1Q86VP6 1230 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 VRK3Q8IV63 474 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 SLC22A15Q8IZD6 547 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 KRT222Q8N1A0 295 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 MPP5Q8N3R9 675 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 OR5K2Q8NHB8 316 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 ACTRT1Q8TDG2 376 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 ASZ1Q8WWH4 475 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 CPT1BQ92523 772 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 P2RY12Q9H244 342 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 KCND1Q9NSA2 647 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 TRMT1Q9NXH9 659 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 ACTR10Q9NZ32 417 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 POLG2Q9UHN1 485 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 CROTQ9UKG9 612 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 PADI1Q9ULC6 663 aa11.1□□□□□ -0.63
SPEN-205ENST00000487496 TDRKHQ9Y2W6 561 aaKnown RBP11.1□□□□□ -0.63
SPEN-205ENST00000487496 PIPSLA2A3N6 862 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 GOLGA8KD6RF30 607 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 GOLGA8TH3BQL2 631 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 NDUFS3O75489 264 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 SCRG1O75711 98 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 TMEM63AO94886 807 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 NTRK1P04629 796 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 APOA4P06727 396 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 PRKAR1AP10644 381 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 MLNP12872 115 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 PVRP15151 417 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 TCN2P20062 427 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 RPS3P23396 243 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPEN-205ENST00000487496 AOAHP28039 575 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 OAS2P29728 719 aaKnown RBP11.09□□□□□ -0.63
SPEN-205ENST00000487496 MC1RQ01726 317 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 CDC20Q12834 499 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
SPEN-205ENST00000487496 DNAJC21Q5F1R6 531 aaKnown RBP11.09□□□□□ -0.63
SPEN-205ENST00000487496 ARMC3Q5W041 872 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 PTRHD1Q6GMV3 140 aaKnown RBP11.09□□□□□ -0.63
SPEN-205ENST00000487496 C16orf46Q6P387 395 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 ZNF605Q86T29 641 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 OR8K5Q8NH50 307 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 CATSPER2Q96P56 530 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 TRAPPC9Q96Q05 1148 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 AKIRIN1Q9H9L7 192 aaPredicted RBP11.09□□□□□ -0.63
SPEN-205ENST00000487496 LHX9Q9NQ69 397 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 LATS2Q9NRM7 1088 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 KCND3Q9UK17 655 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 PLAGL1Q9UM63 463 aa11.09□□□□□ -0.63
SPEN-205ENST00000487496 MRPS18BQ9Y676 258 aaKnown RBP11.09□□□□□ -0.63
SPEN-205ENST00000487496 B8ZZF3 427 aa11.08□□□□□ -0.64
SPEN-205ENST00000487496 ZNF185O15231 689 aa11.08□□□□□ -0.64
SPEN-205ENST00000487496 MAP3K7O43318 606 aa11.08□□□□□ -0.64
SPEN-205ENST00000487496 CPNE3O75131 537 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms