RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 GALPQ9UBC7 116 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 GDF2Q9UK05 429 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 ACSL5Q9ULC5 683 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 SOX13Q9UN79 622 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 PCDHGA3Q9Y5H0 932 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RELNP78509 3460 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 TRBV23OR9-2A0A075B6M9 112 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CCDC187A0A096LP49 1063 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 FAM237BA0A1B0GVD1 139 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MAGEB16A2A368 324 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 OR2AG2A6NM03 316 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 IQCF5A8MTL0 148 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 E7ESA3 106 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 QSOX1O00391 747 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 BRINP1O60477 761 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 SLCO2B1O94956 709 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 GOT2P00505 430 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 KRT14P02533 472 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MPOP05164 745 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MSH3P20585 1137 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 ITGALP20701 1170 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 IDSP22304 550 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MSNP26038 577 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 ITPKBP27987 946 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MAPK1P28482 360 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 PDHA2P29803 388 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 PEBP1P30086 187 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 ACTN2P35609 894 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 TNNT3P45378 269 aaPredicted RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 LEPRP48357 1165 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 VPS41P49754 854 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 INHBCP55103 352 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 ETF1P62495 437 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 HHEXQ03014 270 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 PTK6Q13882 451 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 SPIDRQ14159 915 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 GRB7Q14451 532 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 FASTKD3Q14CZ7 662 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 SEPT7Q16181 437 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 RPE65Q16518 533 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 TYSND1Q2T9J0 566 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CTSL3PQ5NE16 218 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 LYPLAL1Q5VWZ2 237 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 FAM219BQ5XKK7 198 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 KIAA0930Q6ICG6 404 aaPredicted RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 DET1Q7L5Y6 550 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 SLC9B2Q86UD5 537 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 PIM3Q86V86 326 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 HOOK3Q86VS8 718 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CLDN19Q8N6F1 224 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 RCBTB1Q8NDN9 531 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 ACVR1CQ8NER5 493 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 WDR36Q8NI36 951 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 HM13Q8TCT9 377 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 KLHL6Q8WZ60 621 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 FGF11Q92914 225 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 LRRC45Q96CN5 670 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 NXPE2Q96DL1 559 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MFSD3Q96ES6 412 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 TMEM74Q96NL1 305 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 SERPINB12Q96P63 405 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 TCF12Q99081 682 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 COPS8Q99627 209 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MDFIQ99750 246 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CCM2Q9BSQ5 444 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MCMBPQ9BTE3 642 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CARD6Q9BX69 1037 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 TBC1D10AQ9BXI6 508 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 CHRNA10Q9GZZ6 450 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 ABCG4Q9H172 646 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 XAB2Q9HCS7 855 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 SIDT1Q9NXL6 827 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 BFARQ9NZS9 450 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 MOSPD1Q9UJG1 213 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 IKZF3Q9UKT9 509 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 RUVBL2Q9Y230 463 aaKnown RBP5.58□□□□□ -1.52
CUX1-208ENST00000485792 RAXQ9Y2V3 346 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 SAR1BQ9Y6B6 198 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CROCCQ5TZA2 2017 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 CPAMD8Q8IZJ3 1885 aa5.58□□□□□ -1.52
CUX1-208ENST00000485792 FASNP49327 2511 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 A6NHS1 94 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 RHPN2P1A8MT19 583 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 B4E171 279 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 C9orf172C9J069 976 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GOLGA8KD6RF30 607 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GOLGA8TH3BQL2 631 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CCDC188H7C350 402 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 DNALI1O14645 258 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 LIN7AO14910 233 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 PLD2O14939 933 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 ZW10O43264 779 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 KIF1CO43896 1103 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 PRAMEF10O60809 474 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 PIAS1O75925 651 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 USP1O94782 785 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 TIAF1O95411 115 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 PTMAP06454 111 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms