RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CCDC162PA2VCL2 907 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 MROH6A6NGR9 719 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 CFAP99D6REC4 459 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 PSMA3P25788 255 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 GRIA1P42261 906 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 PRKAA1Q13131 559 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 ZIC1Q15915 447 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 PTCHD3Q3KNS1 767 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 IZUMO3Q5VZ72 239 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 CDHR3Q6ZTQ4 885 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 SYVN1Q86TM6 617 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 CARFQ8N187 725 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
ATG4B-221ENST00000483778 LMNTD1Q8N9Z9 388 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 OR52K1Q8NGK4 314 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 OR8K5Q8NH50 307 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 STYXQ8WUJ0 223 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 HEXDCQ8WVB3 486 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 PITPNM3Q9BZ71 974 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 PCMTD2Q9NV79 361 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 SPHK1Q9NYA1 384 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 ACTR10Q9NZ32 417 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 ANKMY1Q9P2S6 941 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
ATG4B-221ENST00000483778 FEZ2Q9UHY8 353 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-221ENST00000483778 ESPL1Q14674 2120 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 DOCK10Q96BY6 2186 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 BHMG1C9JSJ3 638 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-221ENST00000483778 OR1I1O60431 355 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 AP2A1O95782 977 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 ACADLP28330 430 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 CETN2P41208 172 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 CD151P48509 253 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 ITGA1P56199 1179 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 CACNG1Q06432 222 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 NADK2Q4G0N4 442 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 KIAA1328Q86T90 577 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 AMIGO1Q86WK6 493 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 FLVCR1-AS1Q8TAF5 88 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 CPT1BQ92523 772 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 CLIP3Q96DZ5 547 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 CALR3Q96L12 384 aaKnown RBP17.45■□□□□ 0.38
ATG4B-221ENST00000483778 ZNF778Q96MU6 729 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 LRFN5Q96NI6 719 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 ING2Q9H160 280 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 MVB12BQ9H7P6 319 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 LRRC40Q9H9A6 602 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 MLXIPLQ9NP71 852 aa17.45■□□□□ 0.38
ATG4B-221ENST00000483778 PCM1Q15154 2024 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 IFRD1O00458 451 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-221ENST00000483778 KLK3P07288 261 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-221ENST00000483778 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 ETS1P14921 441 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 FOXN2P32314 431 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 RPA4Q13156 261 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 FAM198BQ6UWH4 519 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 UNC5AQ6ZN44 842 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 THAP4Q8WY91 577 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 PPP1R2P1Q96PQ5 205 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 OR2A14Q96R47 310 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 BAG1Q99933 345 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-221ENST00000483778 NLNQ9BYT8 704 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 SPRTNQ9H040 489 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-221ENST00000483778 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-221ENST00000483778 TCFL5Q9UL49 500 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 PLAGL1Q9UM63 463 aa17.44■□□□□ 0.38
ATG4B-221ENST00000483778 SPTAN1Q13813 2472 aaKnown RBP17.43■□□□□ 0.38
ATG4B-221ENST00000483778 H3BMH7 237 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 ZNF749O43361 778 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 IPO7O95373 1038 aaKnown RBP17.43■□□□□ 0.38
ATG4B-221ENST00000483778 RAB40ALP0C0E4 278 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 MSNP26038 577 aaKnown RBP17.43■□□□□ 0.38
ATG4B-221ENST00000483778 UQCRFS1P47985 274 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 GABRA4P48169 554 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 CD97P48960 835 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 GSDMDP57764 484 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 FOXL2P58012 376 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 KCTD19Q17RG1 926 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-221ENST00000483778 ZNF385CQ66K41 422 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-221ENST00000483778 FAM20CQ8IXL6 584 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 SYTL1Q8IYJ3 562 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 ZBTB2Q8N680 514 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 OR13J1Q8NGT2 312 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 HDAC10Q969S8 669 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 HES6Q96HZ4 224 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 SLC25A23Q9BV35 468 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 ETNK1Q9HBU6 452 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 IMPACTQ9P2X3 320 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 CAPN6Q9Y6Q1 641 aa17.43■□□□□ 0.38
ATG4B-221ENST00000483778 SPTBN1Q01082 2364 aaKnown RBP17.42■□□□□ 0.38
ATG4B-221ENST00000483778 SLC5A10A0PJK1 596 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 A6NL46 340 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 C2orf74A8MZ97 194 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 MATN2O00339 956 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 AP2A2O94973 939 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 PTMAP06454 111 aaKnown RBP17.42■□□□□ 0.38
ATG4B-221ENST00000483778 MSL3P1P0C860 447 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 CBSLP0DN79 551 aa17.42■□□□□ 0.38
ATG4B-221ENST00000483778 UGT2B7P16662 529 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms