RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PDGFAP04085 211 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 MSNP26038 577 aaKnown RBP14.78□□□□□ -0.04
LIMS3-203ENST00000480744 CCL11P51671 97 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 MLLT10P55197 1068 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 RPA4Q13156 261 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 KLF1Q13351 362 aaPredicted RBP14.78□□□□□ -0.04
LIMS3-203ENST00000480744 BOP1Q14137 746 aaKnown RBP14.78□□□□□ -0.04
LIMS3-203ENST00000480744 PTCHD3Q3KNS1 767 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 ZNF658BQ4V348 819 aaPredicted RBP14.78□□□□□ -0.04
LIMS3-203ENST00000480744 SYTL3Q4VX76 610 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 CCDC38Q502W7 563 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 PLEKHS1Q5SXH7 462 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 FAM69BQ5VUD6 431 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 IZUMO3Q5VZ72 239 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 TRIM73Q86UV7 250 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 TMEM139Q8IV31 216 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 DSELQ8IZU8 1212 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 TXLNBQ8N3L3 684 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 OR52K1Q8NGK4 314 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 OR5AR1Q8NGP9 310 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 SLC35B2Q8TB61 432 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 ATG4AQ8WYN0 398 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 ELMO1Q92556 727 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 LRFN5Q96NI6 719 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 TRAPPC9Q96Q05 1148 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 ACTR10Q9NZ32 417 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 SERTAD3Q9UJW9 196 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 PRSS21Q9Y6M0 314 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 LIN7AO14910 233 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-203ENST00000480744 GAS8O95995 478 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 FTH1P02794 183 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 GSTM1P09488 218 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 NSG1P42857 185 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 PTGIRP43119 386 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 PGDP52209 483 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 GSTM4Q03013 218 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 LAMB3Q13751 1172 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 UBAP2LQ14157 1087 aaKnown RBP14.77□□□□□ -0.05
LIMS3-203ENST00000480744 NAPRTQ6XQN6 538 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF517Q6ZMY9 492 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-203ENST00000480744 LINC00523Q86TU6 105 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 ATCAYQ86WG3 371 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 SYTL1Q8IYJ3 562 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 ADGRF3Q8IZF5 1079 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 N4BP2L2Q92802 583 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-203ENST00000480744 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.77□□□□□ -0.05
LIMS3-203ENST00000480744 SLC25A23Q9BV35 468 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 PITPNM3Q9BZ71 974 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 ING2Q9H160 280 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 SYTL2Q9HCH5 934 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 PCMTD2Q9NV79 361 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 ICKQ9UPZ9 632 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 ASF1AQ9Y294 204 aa14.77□□□□□ -0.05
LIMS3-203ENST00000480744 TDRKHQ9Y2W6 561 aaKnown RBP14.77□□□□□ -0.05
LIMS3-203ENST00000480744 COL12A1Q99715 3063 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 CCDC162PA2VCL2 907 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 MROH6A6NGR9 719 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 E7EQ34 232 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 QSOX1O00391 747 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 IFNB1P01574 187 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 RAB40ALP0C0E4 278 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 RORAP35398 523 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 CSE1LP55060 971 aaKnown RBP14.76□□□□□ -0.05
LIMS3-203ENST00000480744 ITGA1P56199 1179 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 ITIH4Q14624 930 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF789Q5FWF6 425 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 SPESP1Q6UW49 350 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 FAM198BQ6UWH4 519 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 PPP1R21Q6ZMI0 780 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 CDHR3Q6ZTQ4 885 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 MIB2Q96AX9 1013 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 NLNQ9BYT8 704 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 ANKMY1Q9P2S6 941 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 IMPACTQ9P2X3 320 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 TCFL5Q9UL49 500 aa14.76□□□□□ -0.05
LIMS3-203ENST00000480744 TTLL8A6PVC2 850 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 C9J4A7 227 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 E7EVH7 732 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 ZNF749O43361 778 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 TMEM63AO94886 807 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 OR56A5P0C7T3 313 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 UGT2B7P16662 529 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 FOXN2P32314 431 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 SHMT2P34897 504 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 CDH17Q12864 832 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 DEFB110Q30KQ9 67 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 SEL1L2Q5TEA6 688 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 PACS1Q6VY07 963 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 UNC5AQ6ZN44 842 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 GPR135Q8IZ08 494 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 C19orf47Q8N9M1 422 aaKnown RBP14.75□□□□□ -0.05
LIMS3-203ENST00000480744 HES6Q96HZ4 224 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 ETNK1Q9HBU6 452 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 PLAGL1Q9UM63 463 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 CAPN6Q9Y6Q1 641 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 NAV2Q8IVL1 2488 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 MAST4O15021 2626 aa14.75□□□□□ -0.05
LIMS3-203ENST00000480744 HEATR9A2RTY3 570 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms