RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 XKR8Q9H6D3 395 aa16.19■□□□□ 0.18
TRIM13-208ENST00000478111 MVB12BQ9H7P6 319 aa16.19■□□□□ 0.18
TRIM13-208ENST00000478111 FANCEQ9HB96 536 aa16.19■□□□□ 0.18
TRIM13-208ENST00000478111 NLE1Q9NVX2 485 aaPredicted RBP16.19■□□□□ 0.18
TRIM13-208ENST00000478111 VPS4AQ9UN37 437 aa16.19■□□□□ 0.18
TRIM13-208ENST00000478111 PCDHGB7Q9Y5F8 929 aa16.19■□□□□ 0.18
TRIM13-208ENST00000478111 MACROD2A1Z1Q3 448 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 TPBGLP0DKB5 382 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 VAV2P52735 878 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 RPA4Q13156 261 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 PRKG2Q13237 762 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 SPA17Q15506 151 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 SARM1Q6SZW1 724 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 AMIGO1Q86WK6 493 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 PIANPQ8IYJ0 282 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 EFCAB3Q8N7B9 438 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 GLIS1Q8NBF1 620 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 TFGQ92734 400 aaPredicted RBP16.18■□□□□ 0.18
TRIM13-208ENST00000478111 CDKN2AIPNLQ96HQ2 116 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 FAM60AQ9NP50 221 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 FEZ2Q9UHY8 353 aaPredicted RBP16.18■□□□□ 0.18
TRIM13-208ENST00000478111 SERTAD3Q9UJW9 196 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 ZNF451Q9Y4E5 1061 aa16.18■□□□□ 0.18
TRIM13-208ENST00000478111 MDC1Q14676 2089 aaKnown RBP16.18■□□□□ 0.18
TRIM13-208ENST00000478111 DOCK10Q96BY6 2186 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 IFRD1O00458 451 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 ZNF185O15231 689 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 ZNF749O43361 778 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 HCRTR1O43613 425 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 KLF7O75840 302 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 STK10O94804 968 aaKnown RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 METTL18O95568 372 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 TPH1P17752 444 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 CYP2A7P20853 494 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 GABRA4P48169 554 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 NCF4Q15080 339 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 INPP5JQ15735 1006 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 PRR30Q53SZ7 412 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 ZRANB3Q5FWF4 1079 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 JMJD6Q6NYC1 403 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 RBMXL3Q8N7X1 1067 aaKnown RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 FLVCR1-AS1Q8TAF5 88 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 HGH1Q9BTY7 390 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 LRRC4CQ9HCJ2 640 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 ACTR10Q9NZ32 417 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 ICKQ9UPZ9 632 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 REXO2Q9Y3B8 237 aaKnown RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 EPN1Q9Y6I3 576 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-208ENST00000478111 PRSS21Q9Y6M0 314 aa16.17■□□□□ 0.18
TRIM13-208ENST00000478111 MYO9AB2RTY4 2548 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 CNTRLQ7Z7A1 2325 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 LRBAP50851 2863 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 C2orf74A8MZ97 194 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 E7EQ34 232 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 PSMA3P25788 255 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 ACADLP28330 430 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-208ENST00000478111 RWDD2BP57060 319 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 ATP1A4Q13733 1029 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 ZIC1Q15915 447 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 DBN1Q16643 649 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 PARP6Q2NL67 630 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 HIST2H2BCQ6DN03 193 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 SPESP1Q6UW49 350 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 MED25Q71SY5 747 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 TMEM102Q8N9M5 508 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-208ENST00000478111 LRRC57Q8N9N7 239 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 OR5AR1Q8NGP9 310 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 PPP1R2P1Q96PQ5 205 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 DPH2Q9BQC3 489 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-208ENST00000478111 LACRTQ9GZZ8 138 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 CACNA1DQ01668 2161 aa16.16■□□□□ 0.18
TRIM13-208ENST00000478111 SOWAHDA6NJG2 315 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 A6NL46 340 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 BTNL10A8MVZ5 291 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 SEMA7AO75326 666 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 AP2A2O94973 939 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 TJP3O95049 919 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 CTSBP07858 339 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 GSTM1P09488 218 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 RNF224P0DH78 156 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 CBSLP0DN79 551 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 CBSP35520 551 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 GSTM4Q03013 218 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 CACNG1Q06432 222 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 PCM1Q15154 2024 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 FHL5Q5TD97 284 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 NUP210LQ5VU65 1888 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 UNC5AQ6ZN44 842 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 TAS2R42Q7RTR8 314 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 TRIM73Q86UV7 250 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 STYXQ8WUJ0 223 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 CALR3Q96L12 384 aaKnown RBP16.15■□□□□ 0.18
TRIM13-208ENST00000478111 OR2A14Q96R47 310 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 SMAD5Q99717 465 aaKnown RBP16.15■□□□□ 0.18
TRIM13-208ENST00000478111 MFRPQ9BY79 579 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 SPRTNQ9H040 489 aaPredicted RBP16.15■□□□□ 0.18
TRIM13-208ENST00000478111 VPS37BQ9H9H4 285 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 LUC7LQ9NQ29 371 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms