RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CLEC1AQ8NC01 280 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CCDC110Q8TBZ0 833 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 ATG4AQ8WYN0 398 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 TADA1Q96BN2 335 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 TRIB3Q96RU7 358 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 LYSMD1Q96S90 227 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 SRPK1Q96SB4 655 aaKnown RBP13.68□□□□□ -0.22
ATG9A-220ENST00000475339 GPR63Q9BZJ6 419 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 TRMT1Q9NXH9 659 aaKnown RBP13.68□□□□□ -0.22
ATG9A-220ENST00000475339 PKD2L2Q9NZM6 624 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
ATG9A-220ENST00000475339 PCDHGB6Q9Y5F9 930 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 RTTNQ86VV8 2226 aa13.68□□□□□ -0.22
ATG9A-220ENST00000475339 CCL21O00585 134 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 CEP104O60308 925 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 PYGLP06737 847 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 PIRTP0C851 137 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 HLA-DPA1P20036 260 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 PSMB4P28070 264 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 PTSQ03393 145 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF569Q5MCW4 686 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 KDELC1Q6UW63 502 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 FAM198BQ6UWH4 519 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 RPTNQ6XPR3 784 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 DSELQ8IZU8 1212 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 SLC35B2Q8TB61 432 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 DNAJB14Q8TBM8 379 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 MAIP1Q8WWC4 291 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 UBXN4Q92575 508 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 OXNAD1Q96HP4 312 aaPredicted RBP13.67□□□□□ -0.22
ATG9A-220ENST00000475339 FER1L6-AS2Q96M78 137 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 LRFN5Q96NI6 719 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 TMEM121Q9BTD3 319 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 FICDQ9BVA6 458 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 TLR10Q9BXR5 811 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 ZFYVE1Q9HBF4 777 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 OLAHQ9NV23 265 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 EPHA6Q9UF33 1036 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 SHOC2Q9UQ13 582 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 AAR2Q9Y312 384 aaKnown RBP13.67□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF711Q9Y462 761 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 JRKLQ9Y4A0 524 aa13.67□□□□□ -0.22
ATG9A-220ENST00000475339 FAM221AA4D161 298 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 C5orf60A6NFR6 353 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 LIASO43766 372 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 KLHL41O60662 606 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 EPOP01588 193 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 FGGP02679 453 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 TUBB4BP68371 445 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 SRSF11Q05519 484 aaKnown RBP13.66□□□□□ -0.22
ATG9A-220ENST00000475339 TUBB2AQ13885 445 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 GPR19Q15760 415 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 LONRF2Q1L5Z9 754 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 P3H1Q32P28 736 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 SIRPB2Q5JXA9 342 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 FAM180AQ6UWF9 173 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 TGIF2LYQ8IUE0 185 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 REXO1L1PQ8IX06 675 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
ATG9A-220ENST00000475339 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 PPP4R1Q8TF05 950 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 MRGPRX2Q96LB1 330 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 TUBB2BQ9BVA1 445 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 OSGEPL1Q9H4B0 414 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 RAD18Q9NS91 495 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 KCND1Q9NSA2 647 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 VPS18Q9P253 973 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF148Q9UQR1 794 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
ATG9A-220ENST00000475339 NBEAL1Q6ZS30 2694 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 LOC285095A0A1B0GVY8 99 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 RGSL1A5PLK6 1076 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 IFNB1P01574 187 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 KLK2P20151 261 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 CXCR5P32302 372 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 RORAP35398 523 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 SPINT3P49223 89 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 ARL4DP49703 201 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 Q0VFX4 171 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 SNX1Q13596 522 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 GPR18Q14330 331 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF169Q14929 603 aaPredicted RBP13.65□□□□□ -0.22
ATG9A-220ENST00000475339 NCF4Q15080 339 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 CDSNQ15517 529 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 SLC1A5Q15758 541 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 ALS2CLQ60I27 953 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 XKRXQ6PP77 449 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 TAOK1Q7L7X3 1001 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 SLC35F6Q8N357 371 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 ZNF501Q96CX3 271 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms