RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CA14Q9ULX7 337 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SATB2Q9UPW6 733 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 NAALADL1Q9UQQ1 740 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SNX10Q9Y5X0 201 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 RAD54BQ9Y620 910 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 SCINQ9Y6U3 715 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ZZEF1O43149 2961 aa4.83□□□□□ -1.64
ATPAF1-203ENST00000460928 ATP8B3O60423 1300 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 A0A087X0T9 212 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TMEM247A6NEH6 219 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CFAP73A6NFT4 308 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LOC730098B7Z3J9 87 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 GOLGA8KD6RF30 607 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LEFTY2O00292 366 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TRDMT1O14717 391 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF263O14978 683 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 XPO1O14980 1071 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 COCHO43405 550 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 NCR1O76036 304 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ACTL6BO94805 426 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SEC31AO94979 1220 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 RASAL1O95294 804 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PDGFBP01127 241 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 GSTA1P08263 222 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM228BP0C875 321 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CSH1P0DML2 217 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CSH2P0DML3 217 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SRGAP2BP0DMP2 458 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 RARGP13631 454 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ARSAP15289 507 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CHRM3P20309 590 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CD72P21854 359 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 GCSHP23434 173 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 HOXA9P31269 272 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 HOXD12P35452 270 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 AVPR1BP47901 424 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CLK1P49759 484 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PDE6CP51160 858 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 DGKEP52429 567 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PMS2P54278 862 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PNLIPRP1P54315 467 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ALDH18A1P54886 795 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 VCPP55072 806 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 DAOAP59103 153 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 AP2B1P63010 937 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 BASP1P80723 227 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CDR2Q01850 454 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 OGDHQ02218 1023 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ITIH3Q06033 890 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 GFPT1Q06210 699 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF844Q08AG5 666 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 COX10Q12887 443 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PTP4A2Q12974 167 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 HTR4Q13639 388 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LACTB2Q53H82 288 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 MANEALQ5VSG8 457 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 OTUD1Q5VV17 481 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 BSPRYQ5W0U4 402 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SPECC1LQ69YQ0 1117 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 OR6B2Q6IFH4 312 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 WDR93Q6P2C0 686 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LAYNQ6UX15 382 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 VITQ6UXI7 678 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF554Q86TJ5 538 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ITIH5Q86UX2 942 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LRRTM4Q86VH4 590 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TMTC1Q8IUR5 882 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LURAP1LQ8IV03 231 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC44A2Q8IWA5 706 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SFTPA1Q8IWL2 248 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SIX6OS1Q8N1H7 587 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ELMOD1Q8N336 334 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TTC30BQ8N4P2 665 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ESX1Q8N693 406 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TC2NQ8N9U0 490 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TDRD5Q8NAT2 981 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SIMC1Q8NDZ2 872 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 JOSD2Q8TAC2 188 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 GDAP1Q8TB36 358 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 POC1BQ8TC44 478 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 BPIFB1Q8TDL5 484 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 BCAS4Q8TDM0 211 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 NCSTNQ92542 709 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ARHGEF26Q96DR7 871 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SNF8Q96H20 258 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LRIG1Q96JA1 1093 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 MAELQ96JY0 434 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PPP1R13BQ96KQ4 1090 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PNKPQ96T60 521 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 DDX23Q9BUQ8 820 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 REXO4Q9GZR2 422 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TP63Q9H3D4 680 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CENPHQ9H3R5 247 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 EPS8L2Q9H6S3 715 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CLK4Q9HAZ1 481 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF304Q9HCX3 659 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms