RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ADNPQ9H2P0 1102 aa10.37□□□□□ -0.75
DDX39A-203ENST00000454233 XKR8Q9H6D3 395 aa10.37□□□□□ -0.75
DDX39A-203ENST00000454233 SYTL2Q9HCH5 934 aa10.37□□□□□ -0.75
DDX39A-203ENST00000454233 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
DDX39A-203ENST00000454233 GEMIN8Q9NWZ8 242 aaKnown RBP10.37□□□□□ -0.75
DDX39A-203ENST00000454233 ACTR10Q9NZ32 417 aa10.37□□□□□ -0.75
DDX39A-203ENST00000454233 BAHCC1Q9P281 2608 aa10.37□□□□□ -0.75
DDX39A-203ENST00000454233 TDRKHQ9Y2W6 561 aaKnown RBP10.37□□□□□ -0.75
DDX39A-203ENST00000454233 PIPSLA2A3N6 862 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 C21orf140B9A014 251 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 PRMT5O14744 637 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 PFDN6O15212 129 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 CD3EAPO15446 510 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 CPNE3O75131 537 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 NDUFS3O75489 264 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 SCRG1O75711 98 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 TIAF1O95411 115 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 NTRK1P04629 796 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 RPN2P04844 631 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 APOA4P06727 396 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 PLA2G2AP14555 144 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 MGAT1P26572 445 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 ACADLP28330 430 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 VPS41P49754 854 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 CSE1LP55060 971 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 POLE2P56282 527 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 CRADDP78560 199 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 HSPA14Q0VDF9 509 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 DNASE1L3Q13609 305 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 SEMA3AQ14563 771 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 TRIP13Q15645 432 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 DEFB109BQ30KR1 87 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 PTRHD1Q6GMV3 140 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 LRRC8BQ6P9F7 803 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 NAPRTQ6XQN6 538 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 ADGRF3Q8IZF5 1079 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 MPP5Q8N3R9 675 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 OR5K2Q8NHB8 316 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 GSDMBQ8TAX9 411 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 ASZ1Q8WWH4 475 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 MAGOHBQ96A72 148 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 ZNF501Q96CX3 271 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 PANX3Q96QZ0 392 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 CARD6Q9BX69 1037 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 GRPEL1Q9HAV7 217 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 LATS2Q9NRM7 1088 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 TREX1Q9NSU2 369 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 TTC7AQ9ULT0 858 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 ICKQ9UPZ9 632 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 MRPS18BQ9Y676 258 aaKnown RBP10.36□□□□□ -0.75
DDX39A-203ENST00000454233 PIEZO2Q9H5I5 2752 aa10.36□□□□□ -0.75
DDX39A-203ENST00000454233 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 TMEM150CB9EJG8 249 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 BHMG1C9JSJ3 638 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 ZSCAN12O43309 604 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 KRT14P02533 472 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 KLK3P07288 261 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 ST6GAL1P15907 406 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 F8A1P23610 371 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 NMBRP28336 390 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 OAS2P29728 719 aaKnown RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 CCR7P32248 378 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 TERF1P54274 439 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 RPS15P62841 145 aaKnown RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 GPS1Q13098 491 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 KCNAB2Q13303 367 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 ARMC3Q5W041 872 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 MRNIPQ6NTE8 343 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SPESP1Q6UW49 350 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 UNC5AQ6ZN44 842 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SDCCAG8Q86SQ7 713 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 LDB1Q86U70 411 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 LRRC6Q86X45 466 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SLC22A15Q8IZD6 547 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 RASGEF1CQ8N431 466 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 CT55Q8WUE5 264 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 APOBEC4Q8WW27 367 aaKnown RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SEC14L1Q92503 715 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 CPT1BQ92523 772 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 N4BP2L2Q92802 583 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 TRAPPC9Q96Q05 1148 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 KIFC1Q9BW19 673 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 AP1M1Q9BXS5 423 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 PITPNM3Q9BZ71 974 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SLC7A5P2Q9GIP4 190 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SLC25A18Q9H1K4 315 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 MRM3Q9HC36 420 aaKnown RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 STARD5Q9NSY2 213 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SYBUQ9NX95 663 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 OR6C2Q9NZP2 312 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SAMD15Q9P1V8 674 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 MARCH4Q9P2E8 410 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-203ENST00000454233 GNPTGQ9UJJ9 305 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 TUBD1Q9UJT1 453 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 SERTAD3Q9UJW9 196 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 POLHQ9Y253 713 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 PCDHGA6Q9Y5G7 932 aa10.35□□□□□ -0.75
DDX39A-203ENST00000454233 ATMQ13315 3056 aa10.34□□□□□ -0.75
DDX39A-203ENST00000454233 GOLGA6L10A0A0M3HER8 536 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms