RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ETV5P41161 510 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 CKAP4Q07065 602 aaKnown RBP14.19□□□□□ -0.14
USP39-206ENST00000448971 DHX9Q08211 1270 aaKnown RBP14.19□□□□□ -0.14
USP39-206ENST00000448971 TBR1Q16650 682 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 TYSND1Q2T9J0 566 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 BBS9Q3SYG4 887 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 ZNF658BQ4V348 819 aaPredicted RBP14.19□□□□□ -0.14
USP39-206ENST00000448971 CAPRIN2Q6IMN6 1127 aaKnown RBP14.19□□□□□ -0.14
USP39-206ENST00000448971 OOSP2Q86WS3 158 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 LRRC6Q86X45 466 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 PDIK1LQ8N165 341 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 KRT222Q8N1A0 295 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP39-206ENST00000448971 SPATA4Q8NEY3 305 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 ZNF592Q92610 1267 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 FERD3LQ96RJ6 166 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 KIR3DX1Q9H7L2 352 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 C20orf96Q9NUD7 363 aaPredicted RBP14.19□□□□□ -0.14
USP39-206ENST00000448971 OGFRQ9NZT2 677 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 SLC24A2Q9UI40 661 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 SMAPO00193 183 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 NDC80O14777 642 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 CAPN5O15484 640 aaPredicted RBP14.18□□□□□ -0.14
USP39-206ENST00000448971 PRAMEF10O60809 474 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 SEC31AO94979 1220 aaKnown RBP14.18□□□□□ -0.14
USP39-206ENST00000448971 APOA4P06727 396 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 RPS3P23396 243 aaKnown RBP eCLIP14.18□□□□□ -0.143e-13■■■■□ 26.3
USP39-206ENST00000448971 ARCN1P48444 511 aaKnown RBP14.18□□□□□ -0.14
USP39-206ENST00000448971 CD151P48509 253 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ITGA8P53708 1063 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 MRPS25P82663 173 aaKnown RBP14.18□□□□□ -0.14
USP39-206ENST00000448971 PLOD1Q02809 727 aaPredicted RBP14.18□□□□□ -0.14
USP39-206ENST00000448971 HSPA14Q0VDF9 509 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 LONRF1Q17RB8 773 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 NEPROQ6NW34 567 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ARMC6Q6NXE6 501 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ATG14Q6ZNE5 492 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 TMEM135Q86UB9 458 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ZFAND4Q86XD8 727 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 AGGF1Q8N302 714 aaeCLIP14.18□□□□□ -0.14
USP39-206ENST00000448971 ACVR1CQ8NER5 493 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 GSDMBQ8TAX9 411 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 TFGQ92734 400 aaPredicted RBP14.18□□□□□ -0.14
USP39-206ENST00000448971 SIGLEC10Q96LC7 697 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ARHGAP9Q9BRR9 750 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 P2RY12Q9H244 342 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 FOXJ2Q9P0K8 574 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 CHMP2BQ9UQN3 213 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ASF1AQ9Y294 204 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 VPS9D1Q9Y2B5 631 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 PCDHGA4Q9Y5G9 962 aa14.18□□□□□ -0.14
USP39-206ENST00000448971 ZCWPW2A0A1B0GU75 182 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 SLC5A10A0PJK1 596 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 OR5K3A6NET4 321 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 FAM187AA6NFU0 413 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 EFCAB7A8K855 629 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 C9orf172C9J069 976 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 URI1O94763 535 aaPredicted RBP14.17□□□□□ -0.14
USP39-206ENST00000448971 SFTPCP11686 197 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CCL4P13236 92 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 IVDP26440 423 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 FMO4P31512 558 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CCR7P32248 378 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 SLC1A2P43004 574 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 LEPRP48357 1165 aaKnown RBP14.17□□□□□ -0.14
USP39-206ENST00000448971 ARL4CP56559 192 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CYP4F2P78329 520 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 PRKAA1Q13131 559 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CALCOCO2Q13137 446 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CRYMQ14894 314 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 HIF1AQ16665 826 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 COLEC12Q5KU26 742 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 MANEAQ5SRI9 462 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 TMEM164Q5U3C3 297 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 HIBCHQ6NVY1 386 aaPredicted RBP14.17□□□□□ -0.14
USP39-206ENST00000448971 FAM92BQ6ZTR7 304 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 MAATS1Q7Z4T9 603 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 VASH2Q86V25 355 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 KCNMB4Q86W47 210 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CILP2Q8IUL8 1156 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 ASZ1Q8WWH4 475 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 LPGAT1Q92604 370 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 USP7Q93009 1102 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 ZDHHC12Q96GR4 267 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 C9orf72Q96LT7 481 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 TCF12Q99081 682 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 FAM167BQ9BTA0 163 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CARD6Q9BX69 1037 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CCDC68Q9H2F9 335 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 DPH5Q9H2P9 285 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 MVB12BQ9H7P6 319 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 CRYL1Q9Y2S2 319 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 SNX24Q9Y343 169 aa14.17□□□□□ -0.14
USP39-206ENST00000448971 E5RI56 91 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 H3BMM5 538 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 RAD51CO43502 376 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 TTC4O95801 387 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 C9P02748 559 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms