RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 IMPDH1P20839 514 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 CHI3L1P36222 383 aaPredicted RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 HSPA13P48723 471 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 CREB5Q02930 508 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 LMAN2Q12907 356 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 NAE1Q13564 534 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 ZIK1Q3SY52 487 aaPredicted RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 PRR23BQ6ZRT6 265 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 PARGQ86W56 976 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 LEMD2Q8NC56 503 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 FBXO30Q8TB52 745 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 PYCR2Q96C36 320 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 NSUN5Q96P11 429 aaKnown RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 AKTIPQ9H8T0 292 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 TRPV5Q9NQA5 729 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 PRKAB1Q9Y478 270 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 PTGDR2Q9Y5Y4 395 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 CFAP20Q9Y6A4 193 aaKnown RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 TPRP12270 2363 aaKnown RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 HHLA1C9JL84 531 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 ZNF682O95780 498 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 NAT2P11245 290 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 ENDOUP21128 410 aaKnown RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 ERVFC1P60507 584 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 CD300CQ08708 224 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 DPY19L3Q6ZPD9 716 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 Q6ZVL8 140 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 STK32CQ86UX6 486 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 SYT12Q8IV01 421 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 Q8N9G6 341 aaPredicted RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 OSCP1Q8WVF1 389 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 LRTOMTQ8WZ04 291 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 SIAEQ9HAT2 523 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 TNPO3Q9Y5L0 923 aaKnown RBP10.41□□□□□ -0.74
TOP3B-210ENST00000444502 KCNE2Q9Y6J6 123 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 ZDBF2Q9HCK1 2354 aa10.41□□□□□ -0.74
TOP3B-210ENST00000444502 A0A1W2PPW3 197 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 PRAMEF11O60813 436 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 MMP20O60882 483 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 MLYCDO95822 493 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 GABRB3P28472 473 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 CDKN2DP55273 166 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 CACNG1Q06432 222 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 LCP2Q13094 533 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SMU1Q2TAY7 513 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 ATG14Q6ZNE5 492 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 ZNF621Q6ZSS3 439 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 CCDC103Q8IW40 242 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SCAMP4Q969E2 229 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SPACA7Q96KW9 195 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 C1orf74Q96LT6 269 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 FEM1AQ9BSK4 669 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 TRIM8Q9BZR9 551 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SPHK2Q9NRA0 654 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 C6orf203Q9P0P8 240 aaPredicted RBP10.4□□□□□ -0.74
TOP3B-210ENST00000444502 ADAM23O75077 832 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 PRDX6P30041 224 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 GGT5P36269 586 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 CHRNA6Q15825 494 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 WDR45BQ5MNZ6 344 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 C22orf39Q6P5X5 142 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 PHYKPLQ8IUZ5 450 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 MAELQ96JY0 434 aaKnown RBP10.4□□□□□ -0.74
TOP3B-210ENST00000444502 RIOK2Q9BVS4 552 aaKnown RBP10.4□□□□□ -0.74
TOP3B-210ENST00000444502 FBXL12Q9NXK8 326 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SPEF1Q9Y4P9 236 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 POLR3HQ9Y535 204 aaPredicted RBP10.4□□□□□ -0.74
TOP3B-210ENST00000444502 ATAD5Q96QE3 1844 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SDHDO14521 159 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 CLOCKO15516 846 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 OR1I1O60431 355 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 HOXB2P14652 356 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 RPIAP49247 311 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 PWP1Q13610 501 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 TRAF7Q6Q0C0 670 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 CERS6Q6ZMG9 384 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 APCDD1Q8J025 514 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 DCAF4L2Q8NA75 395 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 RIN3Q8TB24 985 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 HTRA1Q92743 480 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 FAM120BQ96EK7 910 aaKnown RBP10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SNX5Q9Y5X3 404 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 SPACA6W5XKT8 324 aa10.4□□□□□ -0.74
TOP3B-210ENST00000444502 ASCC3Q8N3C0 2202 aaKnown RBP10.4□□□□□ -0.75
TOP3B-210ENST00000444502 DHRS12A0PJE2 317 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 ATG13O75143 517 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 ECI2O75521 394 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 SLC22A3O75751 556 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 S1PR4O95977 384 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 LDLRP01130 860 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 JUNP05412 331 aaKnown RBP10.4□□□□□ -0.75
TOP3B-210ENST00000444502 NCK1P16333 377 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 ZNF12P17014 697 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 TNNI3P19429 210 aa10.4□□□□□ -0.75
TOP3B-210ENST00000444502 TRIM25Q14258 630 aaKnown RBP10.4□□□□□ -0.75
TOP3B-210ENST00000444502 ZNF362Q5T0B9 420 aaPredicted RBP10.4□□□□□ -0.75
TOP3B-210ENST00000444502 TMPRSS11BQ86T26 416 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms