RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ICAM2P13598 275 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ITGA3P26006 1051 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RXRBP28702 533 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 MSX2P35548 267 aaPredicted RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CRKP46108 304 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 BRCC3P46736 316 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CDC20Q12834 499 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SNTB1Q13884 538 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 IDI1Q13907 227 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RALGPS1Q5JS13 557 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CCNJQ5T5M9 372 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 OR7E24Q6IFN5 339 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 DENND1BQ6P3S1 775 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 WASH2PQ6VEQ5 465 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RTL4Q6ZR62 310 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SPATC1Q76KD6 591 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RABEPKQ7Z6M1 372 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 S100A7AQ86SG5 101 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ANKRD46Q86W74 232 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ATCAYQ86WG3 371 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SNX29P2Q8IUI4 249 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 OR10R2Q8NGX6 335 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PLBD2Q8NHP8 589 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 WFIKKN2Q8TEU8 576 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PCNPQ8WW12 178 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 AUTS2Q8WXX7 1259 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 MED8Q96G25 268 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 KLHL5Q96PQ7 755 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RGCCQ9H4X1 137 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 TLR8Q9NR97 1041 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SLC2A9Q9NRM0 540 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NLGN3Q9NZ94 848 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CNTN3Q9P232 1028 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 LIPT1Q9Y234 373 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 C9orf84Q5VXU9 1444 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ABCB11O95342 1321 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 C5orf58C9J3I9 102 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NPIPA5E9PKD4 350 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NPIPA3F8WFD2 350 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PRPF4O43172 522 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 TCF21O43680 179 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PIP5K1CO60331 668 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PLGP00747 810 aaPredicted RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CNPP09543 421 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 OR56A5P0C7T3 313 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 LAP3P28838 519 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 GALNSP34059 522 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RFC2P35250 354 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 DPP6P42658 865 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 LEPRP48357 1165 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 RPL19P84098 196 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 MVKQ03426 396 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CD300CQ08708 224 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PDZK1IP1Q13113 114 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NAE1Q13564 534 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PTPN20Q4JDL3 420 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 AGKQ53H12 422 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 TEX30Q5JUR7 227 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ZBTB37Q5TC79 503 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CDC73Q6P1J9 531 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 DARS2Q6PI48 645 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 WDR59Q6PJI9 974 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CES3Q6UWW8 571 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SCARA5Q6ZMJ2 495 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 CYP4Z1Q86W10 505 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NRROSQ86YC3 692 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PCDH20Q8N6Y1 951 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ZNF454Q8N9F8 522 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 BEST4Q8NFU0 473 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PCDH19Q8TAB3 1148 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 UTP4Q969X6 686 aaKnown RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 BIRC7Q96CA5 298 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 TTLL2Q9BWV7 592 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 STRA6Q9BX79 667 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ARL6Q9H0F7 186 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 ANKRA2Q9H9E1 313 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SPAG4Q9NPE6 437 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NRBP2Q9NSY0 501 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 TBC1D13Q9NVG8 400 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PAK1IP1Q9NWT1 392 aaPredicted RBP5.51□□□□□ -1.53
PTPRC-209ENST00000442510 NPIPA1Q9UND3 350 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PPP1R3CQ9UQK1 317 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 HPSEQ9Y251 543 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SLC27A5Q9Y2P5 690 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 PCDHGB6Q9Y5F9 930 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 SLCO1B1Q9Y6L6 691 aa5.51□□□□□ -1.53
PTPRC-209ENST00000442510 M0QZK8 103 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 INHAP05111 366 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 CBSLP0DN79 551 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 UCHL3P15374 230 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 CBSP35520 551 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 CRADDP78560 199 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 GHRHRQ02643 423 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 NDUFAF6Q330K2 333 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 IFI44LQ53G44 452 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 GLRA4Q5JXX5 417 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 TAS1R3Q7RTX0 852 aa5.5□□□□□ -1.53
PTPRC-209ENST00000442510 PSTKQ8IV42 348 aaKnown RBP5.5□□□□□ -1.53
PTPRC-209ENST00000442510 UNC5CLQ8IV45 518 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms