RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CARD6Q9BX69 1037 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 XKR8Q9H6D3 395 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 AKIRIN1Q9H9L7 192 aaPredicted RBP18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 LHX9Q9NQ69 397 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 GEMIN8Q9NWZ8 242 aaKnown RBP18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 PADI1Q9ULC6 663 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 TTC7AQ9ULT0 858 aaPredicted RBP18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 CDYLQ9Y232 598 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 JRKLQ9Y4A0 524 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 PCDHGA6Q9Y5G7 932 aa18.35■□□□□ 0.53
HMGB3P22-201ENST00000442010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 GSAPA4D1B5 854 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 AP3B1O00203 1094 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 GPC4O75487 556 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 MSL3P1P0C860 447 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 ST6GAL1P15907 406 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 CDH3P22223 829 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 ARNTP27540 789 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 NMBRP28336 390 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 ARL4DP49703 201 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 CDK16Q00536 496 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 KCNJ11Q14654 390 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 TTC27Q6P3X3 843 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 REXO1L1PQ8IX06 675 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 TBC1D21Q8IYX1 336 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 OR8K5Q8NH50 307 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 OR5K2Q8NHB8 316 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 AP1M1Q9BXS5 423 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 ADNPQ9H2P0 1102 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 MRM3Q9HC36 420 aaKnown RBP18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 LATS2Q9NRM7 1088 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 KCND1Q9NSA2 647 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 CATSPERZQ9NTU4 200 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 BFARQ9NZS9 450 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 ASF1AQ9Y294 204 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 MED13Q9UHV7 2174 aa18.34■□□□□ 0.53
HMGB3P22-201ENST00000442010 PCM1Q15154 2024 aa18.33■□□□□ 0.53
HMGB3P22-201ENST00000442010 IQCF5A8MTL0 148 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 CD3EAPO15446 510 aaKnown RBP18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 NTRK1P04629 796 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 PRKAR1AP10644 381 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 SFTPCP11686 197 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 TCN2P20062 427 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 MGAT1P26572 445 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 MC1RQ01726 317 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 CYP1B1Q16678 543 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 ZNF789Q5FWF6 425 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 AARS2Q5JTZ9 985 aaKnown RBP18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 TMTC4Q5T4D3 741 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 ATP1A1-AS1Q5TC04 95 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 ZNF517Q6ZMY9 492 aaPredicted RBP18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 UNC5AQ6ZN44 842 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 VRK3Q8IV63 474 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 SLC22A15Q8IZD6 547 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 SLC38A9Q8NBW4 561 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 FLVCR1-AS1Q8TAF5 88 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 CT55Q8WUE5 264 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 MFSD3Q96ES6 412 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 MS4A14Q96JA4 679 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 PBKQ96KB5 322 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 TRAPPC9Q96Q05 1148 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 P2RY12Q9H244 342 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 GRPEL1Q9HAV7 217 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 SOHLH2Q9NX45 425 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 SYBUQ9NX95 663 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 ACTR10Q9NZ32 417 aa18.33■□□□□ 0.52
HMGB3P22-201ENST00000442010 ANKRD12Q6UB98 2062 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 C2orf74A8MZ97 194 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 F8W8V4 182 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 PRMT5O14744 637 aaPredicted RBP18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 CCNYL3P0C7X3 344 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 PPARGP37231 505 aaPredicted RBP18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 TTPAP49638 278 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 POLE2P56282 527 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 DNASE1L3Q13609 305 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 TRIP13Q15645 432 aaPredicted RBP18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 MPP5Q8N3R9 675 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 SYTL2Q9HCH5 934 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 POLG2Q9UHN1 485 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 ANAPC5Q9UJX4 755 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 KCND3Q9UK17 655 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 SOX13Q9UN79 622 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 NEU2Q9Y3R4 380 aa18.32■□□□□ 0.52
HMGB3P22-201ENST00000442010 CPNE3O75131 537 aaKnown RBP18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 SCRG1O75711 98 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 SLCO2B1O94956 709 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 RECKO95980 971 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 KRT14P02533 472 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 FURINP09958 794 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 PVRP15151 417 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 RPS3P23396 243 aaKnown RBP eCLIP18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 AOAHP28039 575 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 SHMT2P34897 504 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 CCR10P46092 362 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 NFATC3Q12968 1075 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 ABRQ12979 859 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 GPS2Q13227 327 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 SYTL3Q4VX76 610 aa18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 DNAJC21Q5F1R6 531 aaKnown RBP18.31■□□□□ 0.52
HMGB3P22-201ENST00000442010 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms