RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ZNF806P0C7X5 589 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 ACTN1P12814 892 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 CHRNB4P30926 498 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 HOXC13P31276 330 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 SHMT1P34896 483 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 NOVP48745 357 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 PAPOLAP51003 745 aaKnown RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF234Q14588 700 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 BRD3Q15059 726 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 TAF5Q15542 800 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 IGFBP7Q16270 282 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 PDCD2Q16342 344 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 MFSD14CQ5VZR4 134 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 CCDC146Q8IYE0 955 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 PLD5Q8N7P1 536 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 C11orf65Q8NCR3 313 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 TM9SF4Q92544 642 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 PIGTQ969N2 578 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 SCRN2Q96FV2 425 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 PCYT2Q99447 389 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 DDX50Q9BQ39 737 aaKnown RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 LZTS2Q9BRK4 669 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 ARRDC1-AS1Q9H2J1 176 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 TFB2MQ9H5Q4 396 aaKnown RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 PPP1R3EQ9H7J1 279 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 HINT3Q9NQE9 182 aaKnown RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 TAGLN3Q9UI15 199 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 TACC2O95359 2948 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 ATG2BQ96BY7 2078 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 MUC2Q02817 5179 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 UTYO14607 1347 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 IL16Q14005 1332 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 MROH7Q68CQ1 1323 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ASCC3Q8N3C0 2202 aaKnown RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 EDC4Q6P2E9 1401 aaKnown RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 DOCK8Q8NF50 2099 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ANK2Q01484 3957 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 IGLV5-45A0A087WSX0 123 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GOLGA6L10A0A0M3HER8 536 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 CTAGE9A4FU28 777 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNHIT1O43257 154 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 CRLF1O75462 422 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 IGHV4-39P01824 125 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 TFP02787 698 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GALTP07902 379 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 CTAGE8P0CG41 777 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GLULP15104 373 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GPD2P43304 727 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 EFNA5P52803 228 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GNB1P62873 340 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 EFNB1P98172 346 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GPM6BQ13491 265 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 MORC3Q14149 939 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 KRT72Q14CN4 511 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 PPP2R5BQ15173 497 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 HIST2H2ACQ16777 129 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 CRY2Q49AN0 593 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 WDR45BQ5MNZ6 344 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 GGNBP1Q5YKI7 109 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 FAM171BQ6P995 826 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ATF7IPQ6VMQ6 1270 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 NOTCH2NLQ7Z3S9 236 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 TDRPQ86YL5 185 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 CTAGE4Q8IX94 777 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 STPG4Q8N801 248 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 HUS1BQ8NHY5 278 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 SSC4DQ8WTU2 575 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ELP4Q96EB1 424 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 STAMBPL1Q96FJ0 436 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 LRR1Q96L50 414 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ASCL2Q99929 193 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 NEURL2Q9BR09 285 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 REEP2Q9BRK0 252 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 PYGO2Q9BRQ0 406 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 UTP14AQ9BVJ6 771 aaKnown RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 BEX4Q9NWD9 120 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 MAP3K20Q9NYL2 800 aaKnown RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF624Q9P2J8 865 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 BARX2Q9UMQ3 279 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 PRSS21Q9Y6M0 314 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 COL1A2P08123 1366 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 PTPRSQ13332 1948 aa2.69□□□□□ -1.98
HMGB1P18-201ENST00000438801 UMODL1Q5DID0 1318 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 SVEP1Q4LDE5 3571 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 C2CD4DB7Z1M9 353 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TEX22C9J3V5 150 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 HHLA1C9JL84 531 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 IRAK2O43187 625 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 SYNGR3O43761 229 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TACC1O75410 805 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 GJB5O95377 273 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 URODP06132 367 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 LUMP51884 338 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 RPL24P83731 157 aaKnown RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 SLC12A1Q13621 1099 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 EFR3AQ14156 821 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TMEM35AQ53FP2 167 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 WDR38Q5JTN6 314 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 OR7E24Q6IFN5 339 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms