RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 GAGE5Q13069 117 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 GAGE6Q13070 117 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 SMC1AQ14683 1233 aaKnown RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 SF3B4Q15427 424 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 ASIC2Q16515 512 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 RAB6CQ53S08 254 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 LRRC73Q5JTD7 316 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 FAM91A1Q658Y4 838 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 C11orf63Q6NUN7 778 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 SUSD1Q6UWL2 747 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 UNQ6126/PRO20091Q6UXV3 157 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 ASB18Q6ZVZ8 466 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 MEPCEQ7L2J0 689 aaKnown RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 ABI3BPQ7Z7G0 1075 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 METTL27Q8N6F8 245 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 ARL6IP6Q8N6S5 226 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 C10orf53Q8N6V4 93 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 RBMXL3Q8N7X1 1067 aaKnown RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 CTCFLQ8NI51 663 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC20A1Q8WUM9 679 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 SSMEM1Q8WWF3 244 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 DAZLQ92904 295 aaKnown RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 MIB2Q96AX9 1013 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 MLPHQ9BV36 600 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 MRPL9Q9BYD2 267 aaKnown RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 FAM129AQ9BZQ8 928 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 SPRY4Q9C004 299 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 RAB6CQ9H0N0 254 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 OLFML3Q9NRN5 406 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 TXNDC16Q9P2K2 825 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 RHCGQ9UBD6 479 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 ARMCX3Q9UH62 379 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 OR2W1Q9Y3N9 320 aa4.33□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A1W2PPQ1 181 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 NEMP2A6NFY4 417 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TRIM64A6NGJ6 449 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TRIM64BA6NI03 449 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 LACTBL1A8MY62 500 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 INHBAP08476 426 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 ATP6V1B1P15313 513 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 LHX1P48742 406 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TPD52P55327 224 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 ISL1P61371 349 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 LTBQ06643 244 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC20A2Q08357 652 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TRAF3Q13114 568 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 CUL3Q13618 768 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TUBB2AQ13885 445 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 NFATC4Q14934 902 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 KIF19Q2TAC6 998 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 KLHL26Q53HC5 615 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 DNAJC21Q5F1R6 531 aaKnown RBP4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TCTE1Q5JU00 501 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 CCDC158Q5M9N0 1113 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC10A5Q5PT55 438 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 PDSS1Q5T2R2 415 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 C9orf47Q6ZRZ4 202 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 C1QL2Q7Z5L3 287 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 GLRX5Q86SX6 157 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 CFAP206Q8IYR0 622 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 L3MBTL4Q8NA19 623 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 ATAD1Q8NBU5 361 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 OR5M8Q8NGP6 311 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 PSMA8Q8TAA3 256 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 SGK494Q96LW2 274 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 ZNF48Q96MX3 618 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 CPNE1Q99829 537 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 LRRC1Q9BTT6 524 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TUBB2BQ9BVA1 445 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 PRRG4Q9BZD6 226 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 DBNDD1Q9H9R9 158 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 CDH20Q9HBT6 801 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 TRPC7Q9HCX4 862 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 SPHK1Q9NYA1 384 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 KLHL9Q9P2J3 617 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 MTRRQ9UBK8 725 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 CDH7Q9ULB5 785 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 KCNS2Q9ULS6 477 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 DLGAP4Q9Y2H0 992 aa4.32□□□□□ -1.72
HMGB1P45-201ENST00000435986 IGHV4OR15-8A0A075B7B6 117 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 SAA2-SAA4A0A096LPE2 208 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A0G2JNG1 304 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A1W2PRB8 838 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 DENND3A2RUS2 1198 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 OOEPA6NGQ2 149 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 C19orf81C9J6K1 198 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 CLIC2O15247 247 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 SYNGR3O43761 229 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 PGLSO95336 258 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 LIPFP07098 398 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 PLA2G4BP0C869 781 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 CDH1P12830 882 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 CKMT2P17540 419 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 PEX19P40855 299 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 PRKCIP41743 596 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 1159.4 ms