RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 WASF3Q9UPY6 502 aa15.11■□□□□ 0.01
TREX1-201ENST00000433541 RUVBL2Q9Y230 463 aaKnown RBP15.11■□□□□ 0.01
TREX1-201ENST00000433541 CCDC187A0A096LP49 1063 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 IGHV5-10-1A0A0J9YXX1 117 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 PABPN1LA6NDY0 278 aaKnown RBP15.1■□□□□ 0.01
TREX1-201ENST00000433541 TRABD2BA6NFA1 517 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CAPN5O15484 640 aaPredicted RBP15.1■□□□□ 0.01
TREX1-201ENST00000433541 SLCO2B1O94956 709 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 ACSL3O95573 720 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 MPOP05164 745 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 MCM3P25205 808 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 ACADLP28330 430 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CSTF2P33240 577 aaKnown RBP eCLIP15.1■□□□□ 0.01
TREX1-201ENST00000433541 RGS4P49798 205 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 LIMK2P53671 638 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 GFERP55789 205 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 GPX6P59796 221 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 GABREP78334 506 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 KYNUQ16719 465 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 KLHL38Q2WGJ6 581 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 UNC5DQ6UXZ4 953 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 FAM92BQ6ZTR7 304 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 RAB11FIP2Q7L804 512 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 FAM129CQ86XR2 697 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 DCUN1D3Q8IWE4 304 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CPNE9Q8IYJ1 553 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CACTIN-AS1Q8N1I8 211 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 RAB42Q8N4Z0 105 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 OR5K2Q8NHB8 316 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 WDR36Q8NI36 951 aaKnown RBP15.1■□□□□ 0.01
TREX1-201ENST00000433541 INPP5DQ92835 1189 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 GRAMD1AQ96CP6 724 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 MRRFQ96E11 262 aaKnown RBP15.1■□□□□ 0.01
TREX1-201ENST00000433541 ZDHHC12Q96GR4 267 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CMKLR1Q99788 373 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 XKR8Q9H6D3 395 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 LRRC4CQ9HCJ2 640 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 HRASLS2Q9NWW9 162 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CIDEBQ9UHD4 219 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 SLC39A10Q9ULF5 831 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 CDYLQ9Y232 598 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 PSAT1Q9Y617 370 aa15.1■□□□□ 0.01
TREX1-201ENST00000433541 POLR2CP19387 275 aaPredicted RBP15.09■□□□□ 0.01
TREX1-201ENST00000433541 MAP4P27816 1152 aaKnown RBP15.09■□□□□ 0.01
TREX1-201ENST00000433541 GABRB3P28472 473 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 CCKBRP32239 447 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 SHMT2P34897 504 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 SKIV2L2P42285 1042 aaKnown RBP15.09■□□□□ 0.01
TREX1-201ENST00000433541 BDKRB1P46663 353 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 ARL4DP49703 201 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 CLCN7P51798 805 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 PDX1P52945 283 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 CBLBQ13191 982 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
TREX1-201ENST00000433541 KBTBD12Q3ZCT8 623 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 ACSBG2Q5FVE4 666 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 HECTD2Q5U5R9 776 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 GALNT7Q86SF2 657 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 AMIGO1Q86WK6 493 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 SLITRK4Q8IW52 837 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 FBXO39Q8N4B4 442 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 CD200R1Q8TD46 325 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 MAGEC3Q8TD91 643 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 LIN37Q96GY3 246 aaPredicted RBP15.09■□□□□ 0.01
TREX1-201ENST00000433541 VPS39Q96JC1 886 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 SLC30A3Q99726 388 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 NINJ2Q9NZG7 142 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 OGFRQ9NZT2 677 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 PISDQ9UG56 409 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 DHRS7Q9Y394 339 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 LOXL2Q9Y4K0 774 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 NFS1Q9Y697 457 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 CEP295Q9C0D2 2601 aa15.09■□□□□ 0.01
TREX1-201ENST00000433541 AKAP13Q12802 2813 aa15.08■□□□□ 0.01
TREX1-201ENST00000433541 FAM95CA0A1B0GW59 222 aa15.08■□□□□ 0
TREX1-201ENST00000433541 OR5K3A6NET4 321 aa15.08■□□□□ 0
TREX1-201ENST00000433541 CXorf49A8MYA2 514 aaPredicted RBP15.08■□□□□ 0
TREX1-201ENST00000433541 SLU7O95391 586 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 SYF2O95926 243 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 CATP04040 527 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 THRAP10827 490 aa15.08■□□□□ 0
TREX1-201ENST00000433541 ENO3P13929 434 aaPredicted RBP15.08■□□□□ 0
TREX1-201ENST00000433541 RBMS1P29558 406 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 ATP5DP30049 168 aa15.08■□□□□ 0
TREX1-201ENST00000433541 SEPHS1P49903 392 aa15.08■□□□□ 0
TREX1-201ENST00000433541 MAPK10P53779 464 aa15.08■□□□□ 0
TREX1-201ENST00000433541 CDKN2DP55273 166 aa15.08■□□□□ 0
TREX1-201ENST00000433541 CFHR1Q03591 330 aa15.08■□□□□ 0
TREX1-201ENST00000433541 EIF3IQ13347 325 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 TRA2AQ13595 282 aaKnown RBP eCLIP15.08■□□□□ 0
TREX1-201ENST00000433541 SLMAPQ14BN4 828 aa15.08■□□□□ 0
TREX1-201ENST00000433541 CACHD1Q5VU97 1274 aa15.08■□□□□ 0
TREX1-201ENST00000433541 UNQ6494/PRO21346Q6UXR6 183 aa15.08■□□□□ 0
TREX1-201ENST00000433541 ZNF574Q6ZN55 896 aaPredicted RBP15.08■□□□□ 0
TREX1-201ENST00000433541 ZC3HC1Q86WB0 502 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 MYO1HQ8N1T3 1032 aa15.08■□□□□ 0
TREX1-201ENST00000433541 AGBL5Q8NDL9 886 aa15.08■□□□□ 0
TREX1-201ENST00000433541 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0
TREX1-201ENST00000433541 CPNE1Q99829 537 aa15.08■□□□□ 0
TREX1-201ENST00000433541 NRSN2Q9GZP1 204 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms