RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MTBPQ96DY7 904 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 BICD1Q96G01 975 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF558Q96NG5 402 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 FCRL4Q96PJ5 515 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 FNBP1Q96RU3 617 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 INTS14Q96SY0 518 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 SEPHS2Q99611 448 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 LRMDAQ9H2I8 198 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 TRPV4Q9HBA0 871 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 MIOSQ9NXC5 875 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 DPP3Q9NY33 737 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 POMT1Q9Y6A1 747 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 WDR97A6NE52 1622 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 TOP2BQ02880 1626 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 DNMBPQ6XZF7 1577 aa2.99□□□□□ -1.93
HMGB1P27-201ENST00000431429 MAPKBP1O60336 1514 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 RAD54L2Q9Y4B4 1467 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 A4D1N5 150 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 MAGEA13PA6NCF6 341 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 C15orf62A8K5M9 175 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 STX6O43752 255 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 PRSS2P07478 247 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SUPT20HL2P0C7V6 817 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 DAOP14920 347 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 EPCAMP16422 314 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 MCCP23508 829 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 EEF1B2P24534 225 aaKnown RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 TNFRSF8P28908 595 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC6A6P31641 620 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 PTGER4P35408 488 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 CAPZA1P52907 286 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 EEF1A1P68104 462 aaKnown RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 LTBQ06643 244 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SCN1BQ07699 218 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 MZT1Q08AG7 82 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZBTB17Q13105 803 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 PRKAA1Q13131 559 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 UGCGQ16739 394 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 CDO1Q16878 200 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 TWISTNBQ3B726 338 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM174BQ3ZCQ3 159 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMEM35AQ53FP2 167 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SYT14P1Q58G82 188 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 EEF1A1P5Q5VTE0 462 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM91A1Q658Y4 838 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 KRT39Q6A163 491 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 KLC3Q6P597 504 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 NOTUMQ6P988 496 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC27A1Q6PCB7 646 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 LINC00696Q6ZRV3 163 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZBTB49Q6ZSB9 765 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 TLK2Q86UE8 772 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 FBXL14Q8N1E6 418 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF713Q8N859 430 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 TRIML1Q8N9V2 468 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 OR5M8Q8NGP6 311 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 LILRB1Q8NHL6 650 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 KCNE4Q8WWG9 221 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SEMA4DQ92854 862 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 MOB3AQ96BX8 217 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 CDCA5Q96FF9 252 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 OTUB1Q96FW1 271 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 ABHD8Q96I13 439 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF479Q96JC4 524 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SGK494Q96LW2 274 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 C17orf77Q96MU5 243 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 SPATA33Q96N06 139 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 INPP5KQ9BT40 448 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 FNDC11Q9BVV2 318 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 Q9H8V8 135 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 UBTD1Q9HAC8 227 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 DNAJC4Q9NNZ3 241 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 CD93Q9NPY3 652 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 LEF1Q9UJU2 399 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 CDH7Q9ULB5 785 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 MTUS1Q9ULD2 1270 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 RNF150Q9ULK6 438 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 KCNS2Q9ULS6 477 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 PADI2Q9Y2J8 665 aa2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P27-201ENST00000431429 PLB1Q6P1J6 1458 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 TEX14Q8IWB6 1497 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 IGSF1Q8N6C5 1336 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 PCDH11YQ9BZA8 1340 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 A0A0G2JPF8 293 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 HNRNPCL3B7ZW38 293 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM86B1E9PN63 330 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 H0YAE9 185 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SMAD6O43541 496 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 FMO6PO60774 539 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 RNASEH1O60930 286 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLU7O95391 586 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 BMP10O95393 424 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 TFAP2AP05549 437 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 HSP90AB1P08238 724 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM86B2P0C5J1 330 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 HNRNPCL4P0DMR1 293 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 ACP2P11117 423 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 CDH1P12830 882 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms