RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 POU4F1Q01851 419 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 GSTM4Q03013 218 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RPA4Q13156 261 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 NAB1Q13506 487 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 PLEKHS1Q5SXH7 462 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 CEP85LQ5SZL2 805 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 LRRC8EQ6NSJ5 796 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 FAM92BQ6ZTR7 304 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 TMEM26Q6ZUK4 368 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 PDZD3Q86UT5 571 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 VRK3Q8IV63 474 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 SFRP1Q8N474 314 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RNF31Q96EP0 1072 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RMDN2Q96LZ7 410 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 BIRC8Q96P09 236 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 GPR27Q9NS67 375 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 GALPQ9UBC7 116 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RABGEF1Q9UJ41 708 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 CORO1CQ9ULV4 474 aaPredicted RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 ANGPTL3Q9Y5C1 460 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 ST14Q9Y5Y6 855 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 UQCRHLA0A096LP55 91 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 A0A096LPK6 155 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 SUPT3HB4E1H0 165 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 PPM1DO15297 605 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 SUPT3HO75486 399 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 UQCRHP07919 91 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 GFAPP14136 432 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 ECHS1P30084 290 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 LIMK2P53671 638 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RAB10P61026 200 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 FOXM1Q08050 763 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 SF1Q15637 639 aaKnown RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 FAM83EQ2M2I3 478 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 UBAP2Q5T6F2 1119 aaKnown RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 ZNF549Q6P9A3 640 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 C11orf96Q7Z7L8 435 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 DCUN1D3Q8IWE4 304 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 CHCHD4Q8N4Q1 142 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 NKAPQ8N5F7 415 aaKnown RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 IL17FQ96PD4 163 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 P2RY12Q9H244 342 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RNF112Q9ULX5 631 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 PLAAQ9Y263 795 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 DHRS7Q9Y394 339 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 RGS16O15492 202 aaPredicted RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 NUDT21O43809 227 aaKnown RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 NOBOXO60393 691 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 UBXN7O94888 489 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 JMJD7P0C870 316 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 CKMT1AP12532 417 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 BRAFP15056 766 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 GABRB3P28472 473 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 CSTF2P33240 577 aaKnown RBP eCLIP6.84□□□□□ -1.31
CDC7-203ENST00000428239 CCL7P80098 99 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 E2F1Q01094 437 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 PERM1Q5SV97 790 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 HES3Q5TGS1 186 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 WDR93Q6P2C0 686 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 LMNTD1Q8N9Z9 388 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 ACVR1CQ8NER5 493 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 EPS8L3Q8TE67 593 aaKnown RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 SGSM3Q96HU1 749 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 OLFM1Q99784 485 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 STRADBQ9C0K7 418 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 MVB12BQ9H7P6 319 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 WWOXQ9NZC7 414 aa6.84□□□□□ -1.31
CDC7-203ENST00000428239 CPSF2Q9P2I0 782 aaKnown RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 ZNF624Q9P2J8 865 aaPredicted RBP6.84□□□□□ -1.31
CDC7-203ENST00000428239 UNC13CQ8NB66 2214 aa6.84□□□□□ -1.32
CDC7-203ENST00000428239 LRRK1Q38SD2 2015 aa6.84□□□□□ -1.32
CDC7-203ENST00000428239 EME2A4GXA9 379 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 KRT87PA6NCN2 255 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 PCNX2A6NKB5 2137 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CPNE6O95741 557 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CSRP1P21291 193 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 CRABP2P29373 138 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ABRAXAS1Q6UWZ7 409 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 AMIGO1Q86WK6 493 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 RCBTB1Q8NDN9 531 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 OR52E1Q8NGJ3 308 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CD200R1Q8TD46 325 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 LINC00615Q96LM1 132 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 SLC30A3Q99726 388 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ATG10Q9H0Y0 220 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 LRRN3Q9H3W5 708 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SNX15Q9NRS6 342 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 POLG2Q9UHN1 485 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CLCA2Q9UQC9 943 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 PIPSLA2A3N6 862 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SGTAO43765 313 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SHBGP04278 402 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 TFEBP19484 476 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SPINK2P20155 84 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 RPA3P35244 121 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 KPNA2P52292 529 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 LIMK1P53667 647 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms