RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NUSAP1Q9BXS6 441 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF436Q9C0F3 470 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GABARAPL1Q9H0R8 117 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MUC3BQ9H195 1237 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 C2orf40Q9H1Z8 148 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CATSPERBQ9H7T0 1116 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RANGRFQ9HD47 186 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC35C2Q9NQQ7 365 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 DNAJC11Q9NVH1 559 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 INTS7Q9NVH2 962 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 KLHL11Q9NVR0 708 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CUEDC1Q9NWM3 386 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RDH8Q9NYR8 311 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ACTR10Q9NZ32 417 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 COL20A1Q9P218 1284 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 COPZ2Q9P299 210 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RCOR3Q9P2K3 495 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ERVK-18Q9QC07 812 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 TJP2Q9UDY2 1190 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MLXQ9UH92 298 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CYB5R1Q9UHQ9 305 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MRPS7Q9Y2R9 242 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 KCNK7Q9Y2U2 307 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PCDHB5Q9Y5E4 795 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PCDHA1Q9Y5I3 950 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MAGED1Q9Y5V3 778 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A0G2JPF8 293 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A1W2PP18 115 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TCRBV7S3A2A0A539 114 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TCRBV5S2A0A599 114 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMEM82A0PJX8 343 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HMX2A2RU54 273 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM149AA5PLN7 773 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP17L3A6NCW0 530 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP17L4A6NCW7 530 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HNRNPCL3B7ZW38 293 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 UBAP1LF5GYI3 381 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 NR5A2O00482 541 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 NME4O00746 187 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MDM4O15151 490 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADAM12O43184 909 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SIGLEC6O43699 453 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HS6ST1O60243 411 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 LZTS3O60299 673 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SCN2BO60939 215 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 EEDO75530 441 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PIAS1O75925 651 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CCNDBP1O95273 360 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CELF2O95319 508 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 LGI1O95970 557 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CST1P01037 141 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 AHSGP02765 367 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HNRNPCL4P0DMR1 293 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADORA3P0DMS8 318 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 IL7RP16871 459 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 LBPP18428 481 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 NFKB1P19838 968 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 XPAP23025 273 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RPS3P23396 243 aaKnown RBP eCLIP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 STOMP27105 288 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARNTP27540 789 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MAPK1P28482 360 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HIBADHP31937 336 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SHMT2P34897 504 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CA5AP35218 305 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HNF1BP35680 557 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CTSOP43234 321 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MAP2K3P46734 347 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CDK8P49336 464 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MEOX2P50222 304 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 BCAT1P54687 386 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 NAGLUP54802 743 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CDH6P55285 790 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ISL1P61371 349 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 NCS1P62166 190 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CLDN10P78369 228 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RELBQ01201 579 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 LIPEQ05469 1076 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PUDPQ08623 228 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC10A2Q12908 348 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 KCNAB2Q13303 367 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CDK5R2Q13319 367 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 DGCR6Q14129 220 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TIGD6Q17RP2 521 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MICAQ29983 383 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZACNQ401N2 412 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 DALRD3Q5D0E6 543 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZMAT1Q5H9K5 638 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CATSPEREQ5SY80 951 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR158Q5T848 1215 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR139Q6DWJ6 353 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GLYATQ6IB77 296 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANKRD54Q6NXT1 300 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMEM81Q6P7N7 255 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 KLHL17Q6TDP4 642 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMEM270Q6UE05 265 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 KCNT2Q6UVM3 1135 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TFAP2EQ6VUC0 442 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HSDL2Q6YN16 418 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms