RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PLOD1Q02809 727 aaPredicted RBP20.88■□□□□ 0.93
CDCP1-202ENST00000425231 C16orf46Q6P387 395 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 LDB1Q86U70 411 aaPredicted RBP20.88■□□□□ 0.93
CDCP1-202ENST00000425231 TBC1D21Q8IYX1 336 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 OR8K5Q8NH50 307 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 IL22Q9GZX6 179 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 SOHLH2Q9NX45 425 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 MARCH4Q9P2E8 410 aaPredicted RBP20.88■□□□□ 0.93
CDCP1-202ENST00000425231 ICKQ9UPZ9 632 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 PCDHGA6Q9Y5G7 932 aa20.88■□□□□ 0.93
CDCP1-202ENST00000425231 TLN1Q9Y490 2541 aaKnown RBP20.88■□□□□ 0.93
CDCP1-202ENST00000425231 NRDCO43847 1150 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 ST6GAL1P15907 406 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 CT55Q8WUE5 264 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 TWSG1Q9GZX9 223 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 SLC25A18Q9H1K4 315 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 LATS2Q9NRM7 1088 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 CATSPERZQ9NTU4 200 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 ACTR10Q9NZ32 417 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 KCND3Q9UK17 655 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 CDYLQ9Y232 598 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 TCRBV7S3A2A0A539 114 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 IQCF5A8MTL0 148 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 C2orf74A8MZ97 194 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 AP3B1O00203 1094 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 KATNA1O75449 491 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 SCRG1O75711 98 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 FURINP09958 794 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 MSL3P1P0C860 447 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 NMBRP28336 390 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 PPARGP37231 505 aaPredicted RBP20.87■□□□□ 0.93
CDCP1-202ENST00000425231 CDK16Q00536 496 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 DNASE1L3Q13609 305 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 DEFB109BQ30KR1 87 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 FAM199XQ6PEV8 388 aaPredicted RBP20.87■□□□□ 0.93
CDCP1-202ENST00000425231 UNC5AQ6ZN44 842 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 RASGEF1CQ8N431 466 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 SLC38A9Q8NBW4 561 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 OR5K2Q8NHB8 316 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 LKAAEAR1Q8TD35 194 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 TRAPPC9Q96Q05 1148 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 CARD6Q9BX69 1037 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 BFARQ9NZS9 450 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 POLG2Q9UHN1 485 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 TUBD1Q9UJT1 453 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 ANAPC5Q9UJX4 755 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 PCDHB3Q9Y5E6 796 aa20.87■□□□□ 0.93
CDCP1-202ENST00000425231 SPTBP11277 2137 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 F8W8V4 182 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 CD3EAPO15446 510 aaKnown RBP20.86■□□□□ 0.93
CDCP1-202ENST00000425231 GPC4O75487 556 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 PVRP15151 417 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 TPSB2P20231 275 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 KCNAB2Q13303 367 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 TPSAB1Q15661 275 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 SYTL3Q4VX76 610 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 AARS2Q5JTZ9 985 aaKnown RBP20.86■□□□□ 0.93
CDCP1-202ENST00000425231 PRAMEF17Q5VTA0 474 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 LRRC8BQ6P9F7 803 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 ZNF517Q6ZMY9 492 aaPredicted RBP20.86■□□□□ 0.93
CDCP1-202ENST00000425231 TMEM126BQ8IUX1 230 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 VRK3Q8IV63 474 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 SLC22A15Q8IZD6 547 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 RUFY1Q96T51 708 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 KIFC1Q9BW19 673 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 AP1M1Q9BXS5 423 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 JRKLQ9Y4A0 524 aa20.86■□□□□ 0.93
CDCP1-202ENST00000425231 PIPSLA2A3N6 862 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 C21orf140B9A014 251 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 J3QKU1 62 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 PRMT5O14744 637 aaPredicted RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 CPNE3O75131 537 aaKnown RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 CREG1O75629 220 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 RECKO95980 971 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 MGAT1P26572 445 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 SHMT2P34897 504 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 TTPAP49638 278 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 CSE1LP55060 971 aaKnown RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 NFKB2Q00653 900 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 HSPA14Q0VDF9 509 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 ABRQ12979 859 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 GPS2Q13227 327 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 ERV3-1Q14264 604 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 TRIP13Q15645 432 aaPredicted RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 ZNF789Q5FWF6 425 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 TTC27Q6P3X3 843 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 SPESP1Q6UW49 350 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 FLVCR1-AS1Q8TAF5 88 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 APOBEC4Q8WW27 367 aaKnown RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 MFSD3Q96ES6 412 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 MS4A14Q96JA4 679 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 OR2A14Q96R47 310 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 FAM117AQ9C073 453 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 KLHL25Q9H0H3 589 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 P2RY12Q9H244 342 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 SYTL2Q9HCH5 934 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 SYBUQ9NX95 663 aa20.85■□□□□ 0.93
CDCP1-202ENST00000425231 TTC7AQ9ULT0 858 aaPredicted RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 TDRKHQ9Y2W6 561 aaKnown RBP20.85■□□□□ 0.93
CDCP1-202ENST00000425231 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms