RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SDCCAG8Q86SQ7 713 aaPredicted RBP17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 VASH2Q86V25 355 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 AMIGO1Q86WK6 493 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 CILP2Q8IUL8 1156 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 ZNF669Q96BR6 464 aaPredicted RBP17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 HGH1Q9BTY7 390 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 XKR8Q9H6D3 395 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 IL1RAPL1Q9NZN1 696 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 RNF14Q9UBS8 474 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 GNPTGQ9UJJ9 305 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 ICKQ9UPZ9 632 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 RPS6KL1Q9Y6S9 549 aa17.38■□□□□ 0.37
IGHV3-47-201ENST00000425060 LOC400499M0QZD8 3231 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 UBA6A0AVT1 1052 aaPredicted RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 STK17BO94768 372 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 USP1O94782 785 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 PAMP19021 973 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 PRDX3P30048 256 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 CSE1LP55060 971 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 EIF3BP55884 814 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 PRKAA1Q13131 559 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 DNAJC21Q5F1R6 531 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 ZNF789Q5FWF6 425 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 MANEAQ5SRI9 462 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 RNF187Q5TA31 235 aaPredicted RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 PTRHD1Q6GMV3 140 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 ARMC6Q6NXE6 501 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 FBXO38Q6PIJ6 1188 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 PCSK4Q6UW60 755 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 HOOK3Q86VS8 718 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 KLHL7Q8IXQ5 586 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 SIDT2Q8NBJ9 832 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 RUNDC3BQ96NL0 473 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 PANX3Q96QZ0 392 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 TRIT1Q9H3H1 467 aaKnown RBP17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 C1GALT1Q9NS00 363 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 ASIC3Q9UHC3 531 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 POLG2Q9UHN1 485 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 BTRCQ9Y297 605 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 FAM169AQ9Y6X4 670 aa17.37■□□□□ 0.37
IGHV3-47-201ENST00000425060 CCDC188H7C350 402 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 ZBTB11O95625 1053 aaPredicted RBP17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 S1PR4O95977 384 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 APOA4P06727 396 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 EBLN1P0CF75 366 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 ZNF28P17035 718 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 FMO4P31512 558 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 ATP1A2P50993 1020 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 HSD11B2P80365 405 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 MAP7Q14244 749 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 GBX1Q14549 363 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 KCNAB1Q14722 419 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 UNC5AQ6ZN44 842 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 SYDE1Q6ZW31 735 aaPredicted RBP17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 PCGF5Q86SE9 256 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 CACNA2D3Q8IZS8 1091 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 NLGN4XQ8N0W4 816 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 C17orf53Q8N3J3 647 aaPredicted RBP17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 OTUD6BQ8N6M0 293 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 NLGN4YQ8NFZ3 816 aaPredicted RBP17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 UBL7Q96S82 380 aaPredicted RBP17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 MENTQ9BUN1 341 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 PITPNM3Q9BZ71 974 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 LATS2Q9NRM7 1088 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 CACNA1GO43497 2377 aa17.36■□□□□ 0.37
IGHV3-47-201ENST00000425060 KPNA5O15131 536 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 SPAG6O75602 509 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 ESR1P03372 595 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 MAP4P27816 1152 aaKnown RBP17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 PAFAH1B1P43034 410 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 DR1Q01658 176 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 ABRQ12979 859 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 GRB7Q14451 532 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 KYNUQ16719 465 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 MSS51Q4VC12 460 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 PLEKHS1Q5SXH7 462 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 IZUMO3Q5VZ72 239 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 BPHLQ86WA6 291 aaPredicted RBP17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 DENND6AQ8IWF6 608 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 FLVCR1-AS1Q8TAF5 88 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 TTC9Q92623 222 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 STAMBPL1Q96FJ0 436 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 FCRL4Q96PJ5 515 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 INTS10Q9NVR2 710 aaKnown RBP17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 OR6C2Q9NZP2 312 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 CRYL1Q9Y2S2 319 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 MAD1L1Q9Y6D9 718 aa17.35■□□□□ 0.37
IGHV3-47-201ENST00000425060 LOC101059948A0A1B0GTJ6 334 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 GSAPA4D1B5 854 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 SLC9B1P1A6NJY1 282 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 H3BMM5 538 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 PFDN6O15212 129 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 TP73O15350 636 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 TTI1O43156 1089 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 NIPSNAP2O75323 286 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 TIAF1O95411 115 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 CDH3P22223 829 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 SHMT2P34897 504 aa17.34■□□□□ 0.37
IGHV3-47-201ENST00000425060 RHDQ02161 417 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms