RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 POMZP3Q6PJE2 187 aa12.69□□□□□ -0.38
SCN1B-202ENST00000415950 PIWIL3Q7Z3Z3 882 aaKnown RBP12.69□□□□□ -0.38
SCN1B-202ENST00000415950 SPATA19Q7Z5L4 167 aa12.69□□□□□ -0.38
SCN1B-202ENST00000415950 TTC29Q8NA56 475 aaPredicted RBP12.69□□□□□ -0.38
SCN1B-202ENST00000415950 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
SCN1B-202ENST00000415950 CLP1Q92989 425 aaKnown RBP12.69□□□□□ -0.38
SCN1B-202ENST00000415950 PRICKLE1Q96MT3 831 aaPredicted RBP12.69□□□□□ -0.38
SCN1B-202ENST00000415950 FCRL4Q96PJ5 515 aa12.69□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF607Q96SK3 696 aa12.69□□□□□ -0.38
SCN1B-202ENST00000415950 SUCOQ9UBS9 1254 aaKnown RBP12.69□□□□□ -0.38
SCN1B-202ENST00000415950 EVLQ9UI08 416 aaPredicted RBP12.69□□□□□ -0.38
SCN1B-202ENST00000415950 UPK3BL1B0FP48 263 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 UPK3BL2E5RIL1 263 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 FBP2O00757 339 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TSPAN4O14817 238 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 FFAR2O15552 330 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TLX1P31314 330 aaPredicted RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 EIF2B5Q13144 721 aaKnown RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF423Q2M1K9 1284 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 SERPINA13PQ6UXR4 307 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF655Q8N720 491 aaPredicted RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 FNDC8Q8TC99 324 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 SPATA5L1Q9BVQ7 753 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TBC1D17Q9HA65 648 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TUBA8Q9NY65 449 aaPredicted RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 KDM3BQ7LBC6 1761 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 UGT2B4P06133 528 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 SLC13A2Q13183 592 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TOMM20Q15388 145 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 FAM220AQ7Z4H9 259 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 PEG10Q86TG7 708 aaKnown RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 MON1AQ86VX9 555 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 FAM110BQ8TC76 370 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 NSMCE3Q96MG7 304 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 SORT1Q99523 831 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 AQP12BA6NM10 295 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 H3BNH8 94 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 UGT2B17O75795 530 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 OR1D2P34982 312 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 RPS3AP61247 264 aaKnown RBP12.68□□□□□ -0.38
SCN1B-202ENST00000415950 ENPEPQ07075 957 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 C2orf80Q0P641 193 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TYSND1Q2T9J0 566 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 SMYD5Q6GMV2 418 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 FAM171BQ6P995 826 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 AQP12AQ8IXF9 295 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 ING5Q8WYH8 240 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 ZFP3Q96NJ6 502 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 LAMA4Q16363 1823 aa12.68□□□□□ -0.38
SCN1B-202ENST00000415950 TRBV23OR9-2A0A075B6M9 112 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 OR2AG2A6NM03 316 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 EFCAB9A8MZ26 197 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 PPP6CO00743 305 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 ANXA4P09525 319 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SAGP10523 405 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SLC5A2P31639 672 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 CCL23P55773 120 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 C1QTNF8P60827 252 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SCN1BQ07699 218 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF789Q5FWF6 425 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 PDE12Q6L8Q7 609 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 KLHL24Q6TFL4 600 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SLC15A3Q8IY34 581 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 FIBCD1Q8N539 461 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 TOP6BLQ8N6T0 577 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 MTERF1Q99551 399 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 LRRC3Q9BY71 257 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 LMAN2LQ9H0V9 348 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 C11orf16Q9NQ32 467 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SACM1LQ9NTJ5 587 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 CNTN3Q9P232 1028 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 AASSQ9UDR5 926 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 RAI2Q9Y5P3 530 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 STYXL1Q9Y6J8 313 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 A0A1B0GTW7 788 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 STX16O14662 325 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 G6PDP11413 515 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 PCSK6P29122 969 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 HERVK_113P63132 956 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 PMS2P3Q13401 168 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 BHLHB9Q6PI77 547 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 ADGRG6Q86SQ4 1221 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 GHDCQ8N2G8 530 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 FAM98AQ8NCA5 519 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SNX27Q96L92 541 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 TEFMQ96QE5 360 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 ERVK-6Q9BXR3 956 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 KAT8Q9H7Z6 458 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 STOML2Q9UJZ1 356 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF99A8MXY4 864 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 CDK14O94921 469 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms