RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MTFMTQ96DP5 389 aaKnown RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PERPQ96FX8 193 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 C5orf30Q96GV9 206 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PRR11Q96HE9 360 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 BOD1Q96IK1 185 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PLEKHA8Q96JA3 519 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF578Q96N58 590 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 SPATA13Q96N96 652 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 C8orf49Q96NF6 230 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 TAAR6Q96RI8 345 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 SPATA25Q9BR10 227 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PIMREGQ9BSJ6 248 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 CNPY3Q9BT09 278 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PAPOLGQ9BWT3 736 aaKnown RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 GON7Q9BXV9 100 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PARD6GQ9BYG4 376 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PCDH11XQ9BZA7 1347 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PCDH11YQ9BZA8 1340 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 ZDHHC5Q9C0B5 715 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 YIPF3Q9GZM5 350 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF350Q9GZX5 532 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 NAPBQ9H115 298 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 UPF3AQ9H1J1 476 aaKnown RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 SLC25A18Q9H1K4 315 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 SLC6A15Q9H2J7 730 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 DPEP3Q9H4B8 488 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 RGCCQ9H4X1 137 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 MMP25Q9NPA2 562 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 SERHLQ9NQF3 203 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 TREX1Q9NSU2 369 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 SPATA6Q9NWH7 488 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 MGAT4CQ9UBM8 478 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 DNAJB11Q9UBS4 358 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 CTNNAL1Q9UBT7 734 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 CLEC2DQ9UHP7 191 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 ADAMTS5Q9UNA0 930 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 CDC14AQ9UNH5 594 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 VWA7Q9Y334 891 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 NOC2LQ9Y3T9 749 aaKnown RBP3.57□□□□□ -1.84
SF3B1-203ENST00000414174 TRAF6Q9Y4K3 522 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 HEY1Q9Y5J3 304 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 GMPPBQ9Y5P6 360 aa3.57□□□□□ -1.84
SF3B1-203ENST00000414174 PTCH1Q13635 1447 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 POLR3AO14802 1390 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 MTUS2Q5JR59 1369 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PVALEFA0A1B0GWK0 134 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PQ72 361 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PQJ5 194 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PRG0 241 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 RAB19A4D1S5 217 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 OR5K3A6NET4 321 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CFAP73A6NFT4 308 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TRPC5OSA6NMA1 111 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 E5RI56 91 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 E7ESA3 106 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NPIPA2E9PIF3 369 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SNAP23O00161 211 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TLR4O00206 839 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LDLRAD4O15165 306 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 COCHO43405 550 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CHMP2AO43633 222 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TSPAN2O60636 221 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 JAK2O60674 1132 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 UGDHO60701 494 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NOS1APO75052 506 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SCGB2A1O75556 95 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PDE9AO76083 593 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 OAZ2O95190 189 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 OR2C1O95371 312 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 MBD3O95983 291 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 GNAI2P04899 355 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SERPINA5P05154 406 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 GNAO1P09471 354 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CTXN2P0C2S0 81 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CCL2P13500 99 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 OSMP13725 252 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CDH2P19022 906 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TNNI3P19429 210 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 FUT1P19526 365 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TUBG1P23258 451 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 EDNRBP24530 442 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PSMB6P28072 239 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CCND3P30281 292 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SERPINB1P30740 379 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 THBS2P35442 1172 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 GGT5P36269 586 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PGM1P36871 562 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NAA10P41227 235 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PRKCIP41743 596 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NRIP1P48552 1158 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CDC34P49427 236 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TMED10P49755 219 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 P2RY4P51582 365 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 MAP2K6P52564 334 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CEBPGP53567 150 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLC16A1P53985 500 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PDE1AP54750 535 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 EMP2P54851 167 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CDH17Q12864 832 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms