RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 UBXN10Q96LJ8 280 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 APOLD1Q96LR9 279 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 DERL2Q9GZP9 239 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 OR52A5Q9H2C5 316 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 TAAR2Q9P1P5 351 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 ST14Q9Y5Y6 855 aa16.14■□□□□ 0.17
TSPAN4-208ENST00000409531 GOLGA4Q13439 2230 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 A0A1W2PPM1 405 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 FAM221BA6H8Z2 402 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 YY2O15391 372 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 SNX2O60749 519 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 KLHL2O95198 593 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 LTA4HP09960 611 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 PYGBP11216 843 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 CKMT1AP12532 417 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 F3P13726 295 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 KRT4P19013 534 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ACP1P24666 158 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 RPL10P27635 214 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ACADVLP49748 655 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 KPNA2P52292 529 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ATP6V0D1P61421 351 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 DAB2P98082 770 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 GPS2Q13227 327 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ILKQ13418 452 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 TCEA2Q15560 299 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 SEPT7Q16181 437 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 TSNAXIP1Q2TAA8 658 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 DEFB133Q30KQ1 61 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 CCDC157Q569K6 752 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 TNFAIP8L3Q5GJ75 292 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ZCCHC8Q6NZY4 707 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 TMEM207Q6UWW9 146 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ABRAXAS1Q6UWZ7 409 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 SRRM1Q8IYB3 904 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 AVL9Q8NBF6 648 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 FAM46DQ8NEK8 389 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ALKBH8Q96BT7 664 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 SMC6Q96SB8 1091 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 WWP1Q9H0M0 922 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 NMRAL1Q9HBL8 299 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 PCMTD2Q9NV79 361 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 TBC1D29Q9UFV1 150 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 HEBP2Q9Y5Z4 205 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 ACTL7BQ9Y614 415 aa16.13■□□□□ 0.17
TSPAN4-208ENST00000409531 CCDC189A1A4V9 331 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 RFPL3O75679 317 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 TSPAN12O95859 305 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 RPN2P04844 631 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 CELA2BP08218 269 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 GSTA1P08263 222 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 SPINK2P20155 84 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 PDHA2P29803 388 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 CCNFP41002 786 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 CCT5P48643 541 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 DUSP3P51452 185 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 PGGT1BP53609 377 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 CSHL1Q14406 222 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 AGBL2Q5U5Z8 902 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 CAPRIN2Q6IMN6 1127 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 XKR5Q6UX68 686 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 UNC5DQ6UXZ4 953 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 VRK3Q8IV63 474 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 ANKRD49Q8WVL7 239 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 SH3GL2Q99962 352 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 PRDM8Q9NQV8 689 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 EVA1BQ9NVM1 165 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 NCKIPSDQ9NZQ3 722 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 DCDC2Q9UHG0 476 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 PSMD13Q9UNM6 376 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 NEUROG3Q9Y4Z2 214 aa16.12■□□□□ 0.17
TSPAN4-208ENST00000409531 CHD8Q9HCK8 2581 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 KIR2DS5A0A0G2JLQ3 304 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 A0A0G2JNG1 304 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 A6NCN8 305 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 GOLGA8RI6L899 631 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 KIR2DS3K7RE56 304 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 COPEO14579 308 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 MATN4O95460 622 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 CATP04040 527 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 C8GP07360 202 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 ACADLP28330 430 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 SLC18A2Q05940 514 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 SP140Q13342 867 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 KIR2DS5Q14953 304 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 DHRS13Q6UX07 377 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 TMPRSS7Q7RTY8 843 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 PIWIL4Q7Z3Z4 852 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 CLEC14AQ86T13 490 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 CENPLQ8N0S6 344 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 GALNT15Q8N3T1 639 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 MAGEC3Q8TD91 643 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 ZDHHC1Q8WTX9 485 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 TFGQ92734 400 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 RMDN2Q96LZ7 410 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 C12orf66Q96MD2 445 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 MKS1Q9NXB0 559 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 MSRB2Q9Y3D2 182 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 KNTC1P50748 2209 aa16.11■□□□□ 0.17
TSPAN4-208ENST00000409531 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms