RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ZPBPQ9BS86 351 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 HGH1Q9BTY7 390 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 SRMSQ9H3Y6 488 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 PLAC1Q9HBJ0 212 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 ICKQ9UPZ9 632 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 ASF1AQ9Y294 204 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 TMEM184BQ9Y519 407 aaPredicted RBP16.22■□□□□ 0.19
APTR-201ENST00000398043 FAM169AQ9Y6X4 670 aa16.22■□□□□ 0.19
APTR-201ENST00000398043 MDC1Q14676 2089 aaKnown RBP16.22■□□□□ 0.19
APTR-201ENST00000398043 K7ENP7 123 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 TTI1O43156 1089 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 RASSF9O75901 435 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 DLGAP3O95886 979 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 FGF5P12034 268 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 FOLR1P15328 257 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 POLR2CP19387 275 aaPredicted RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 EIF3BP55884 814 aaKnown RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 KRT33BQ14525 404 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 SYTL3Q4VX76 610 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 DNAJC21Q5F1R6 531 aaKnown RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 DNTTIP2Q5QJE6 756 aaKnown RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 RNF187Q5TA31 235 aaPredicted RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 IZUMO3Q5VZ72 239 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 PTRHD1Q6GMV3 140 aaKnown RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 HIBCHQ6NVY1 386 aaPredicted RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 INO80CQ6PI98 192 aaPredicted RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 SDCCAG8Q86SQ7 713 aaPredicted RBP16.21■□□□□ 0.19
APTR-201ENST00000398043 AMIGO1Q86WK6 493 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 IGDCC3Q8IVU1 814 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 D2HGDHQ8N465 521 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 FLVCR1-AS1Q8TAF5 88 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 PANX3Q96QZ0 392 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 TRIM51Q9BSJ1 452 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 TSSK1BQ9BXA7 367 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 PITPNM3Q9BZ71 974 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 XKR8Q9H6D3 395 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 LATS2Q9NRM7 1088 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 BTRCQ9Y297 605 aa16.21■□□□□ 0.19
APTR-201ENST00000398043 UBA6A0AVT1 1052 aaPredicted RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 MATN2O00339 956 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 POLR1CO15160 346 aaPredicted RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 BANF1O75531 89 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 ESR1P03372 595 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 APOA4P06727 396 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 WT1P19544 449 aaPredicted RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 PAFAH1B1P43034 410 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 CSE1LP55060 971 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 CXADRP78310 365 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 DHX9Q08211 1270 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 VAC14Q08AM6 782 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 CBLBQ13191 982 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 GRB7Q14451 532 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 IL11RAQ14626 422 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 MORF4L2Q15014 288 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 LONRF1Q17RB8 773 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 TIPARPQ7Z3E1 657 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 GPR155Q7Z3F1 870 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 DENND6AQ8IWF6 608 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 UNC5BQ8IZJ1 945 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 STAMBPL1Q96FJ0 436 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 OR6C1Q96RD1 312 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 WDR83Q9BRX9 315 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 TRIT1Q9H3H1 467 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.2■□□□□ 0.18
APTR-201ENST00000398043 GALPQ9UBC7 116 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 POLG2Q9UHN1 485 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 CRYL1Q9Y2S2 319 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 MED16Q9Y2X0 877 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 MAD1L1Q9Y6D9 718 aa16.2■□□□□ 0.18
APTR-201ENST00000398043 ATRXP46100 2492 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 KPNA5O15131 536 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 NIPSNAP2O75323 286 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 SEC31AO94979 1220 aaKnown RBP16.19■□□□□ 0.18
APTR-201ENST00000398043 F7P08709 466 aaPredicted RBP16.19■□□□□ 0.18
APTR-201ENST00000398043 ZNF28P17035 718 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 PGAM1P18669 254 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 PRDX3P30048 256 aaKnown RBP16.19■□□□□ 0.18
APTR-201ENST00000398043 FMO4P31512 558 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 FOXM1Q08050 763 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 KCNAB1Q14722 419 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 ZNF470Q6ECI4 717 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 ZNF549Q6P9A3 640 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 FBXO38Q6PIJ6 1188 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 UNC5DQ6UXZ4 953 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 UNC5AQ6ZN44 842 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 VASH2Q86V25 355 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 LMNTD2Q8IXW0 634 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 OTUD6BQ8N6M0 293 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 PWWP2AQ96N64 755 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 EBNA1BP2Q99848 306 aaKnown RBP16.19■□□□□ 0.18
APTR-201ENST00000398043 C1GALT1Q9NS00 363 aa16.19■□□□□ 0.18
APTR-201ENST00000398043 H3BMM5 538 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 SMAPO00193 183 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 RAD1O60671 282 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 STK17BO94768 372 aa16.18■□□□□ 0.18
APTR-201ENST00000398043 TIAF1O95411 115 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms