RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 RSAD1Q9HA92 442 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 COPS3Q9UNS2 423 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 MAFBQ9Y5Q3 323 aaPredicted RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 PEX16Q9Y5Y5 336 aa8.29□□□□□ -1.08
NDE1-202ENST00000396355 MKI67P46013 3256 aaKnown RBP8.29□□□□□ -1.08
NDE1-202ENST00000396355 TMEM233B4DJY2 109 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ZNF879B4DU55 563 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 SPATA31C2B4DYI2 1134 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ERBB2P04626 1255 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CNPP09543 421 aaKnown RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 DNAJB1P25685 340 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 DCKP27707 260 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 SSTR4P31391 388 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CNTN2Q02246 1040 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 POU4F2Q12837 409 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PRKAA1Q13131 559 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 SLAMF1Q13291 335 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CAPSQ13938 189 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 HIST2H2ACQ16777 129 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 RFX4Q33E94 735 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 Q3ZCU0 254 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ANKRD54Q6NXT1 300 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 SLC16A13Q7RTY0 426 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ATAD1Q8NBU5 361 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 FEZF2Q8TBJ5 459 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 NEDD4LQ96PU5 975 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TUBA1CQ9BQE3 449 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CDCP1Q9H5V8 836 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 NMRAL1Q9HBL8 299 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 MYO10Q9HD67 2058 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 NLKQ9UBE8 527 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 C3orf18Q9UK00 162 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GJD2Q9UKL4 321 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 SEPT4O43236 478 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PIGRP01833 764 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ACRP10323 421 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PRKAR1AP10644 381 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ITGA2P17301 1181 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 LBPP18428 481 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 NPR2P20594 1047 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 AGXTP21549 392 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CTNNB1P35222 781 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ARL2P36404 184 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ATP6V1E1P36543 226 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CPOXP36551 454 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 MTHFRP42898 656 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 HLCSP50747 726 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 IL18Q14116 193 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 DPYSL3Q14195 570 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GPAT3Q53EU6 434 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ZYG11AQ6WRX3 759 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 MILR1Q7Z6M3 343 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 C11orf96Q7Z7L8 435 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TDRPQ86YL5 185 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 EID3Q8N140 333 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TMEM199Q8N511 208 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PIK3C3Q8NEB9 887 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ANGPTL6Q8NI99 470 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 DCAKDQ8WVC6 231 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CPT1BQ92523 772 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GIMAP5Q96F15 307 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 WDR77Q9BQA1 342 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 CRB3Q9BUF7 120 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GON7Q9BXV9 100 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 MROH8Q9H579 483 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GMPR2Q9P2T1 348 aaKnown RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 MORF4L1Q9UBU8 362 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 POFUT2Q9Y2G5 429 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ZNF451Q9Y4E5 1061 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PCDHGB6Q9Y5F9 930 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 MAGED1Q9Y5V3 778 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 SYNDIG1LA6NDD5 238 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 LRRC14BA6NHZ5 514 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ARHGEF33A8MVX0 844 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CLTBP09497 229 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 HTR1BP28222 390 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 PTPN7P35236 360 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 BRCC3P46736 316 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 LEPRP48357 1165 aaKnown RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 NUDT6P53370 316 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 GDF10P55107 478 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TXNL4AP83876 142 aaKnown RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 ARF5P84085 180 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 HSF2Q03933 536 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 TNK2Q07912 1038 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 XKR3Q5GH77 459 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 CATSPEREQ5SY80 951 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 ETFRF1Q6IPR1 90 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 RAB44Q7Z6P3 723 aaPredicted RBP8.28□□□□□ -1.08
NDE1-202ENST00000396355 LYSMD2Q8IV50 215 aa8.28□□□□□ -1.08
NDE1-202ENST00000396355 DENND6AQ8IWF6 608 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms