RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PFDN6O15212 129 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 CD3EAPO15446 510 aaKnown RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 OR1I1O60431 355 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 CPNE3O75131 537 aaKnown RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 NTRK1P04629 796 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 RPN2P04844 631 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 APOA4P06727 396 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 KLK3P07288 261 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 KCNJ1P48048 391 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 TMED2Q15363 201 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 GPR19Q15760 415 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 DEFB109BQ30KR1 87 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 PRICKLE2Q7Z3G6 844 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 TBC1D21Q8IYX1 336 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 OR5AR1Q8NGP9 310 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 APOBEC4Q8WW27 367 aaKnown RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 N4BP2L2Q92802 583 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 PBKQ96KB5 322 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 NAP1L3Q99457 506 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-205ENST00000395794 SLC7A5P2Q9GIP4 190 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 XKR8Q9H6D3 395 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 ACTR10Q9NZ32 417 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 SERTAD3Q9UJW9 196 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 BTRCQ9Y297 605 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 JRKLQ9Y4A0 524 aa13.34□□□□□ -0.27
CXCL12-205ENST00000395794 SLC5A10A0PJK1 596 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 PIPSLA2A3N6 862 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 J3QKU1 62 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 BTN3A3O00478 584 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 SLC28A2O43868 658 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 NDUFS3O75489 264 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 TIAF1O95411 115 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 ITGB6P18564 788 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 TPSB2P20231 275 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 CSE1LP55060 971 aaKnown RBP13.33□□□□□ -0.28
CXCL12-205ENST00000395794 RPS15P62841 145 aaKnown RBP13.33□□□□□ -0.28
CXCL12-205ENST00000395794 CRADDP78560 199 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 HSPA14Q0VDF9 509 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 KCNAB2Q13303 367 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 DNASE1L3Q13609 305 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 TPSAB1Q15661 275 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.28
CXCL12-205ENST00000395794 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 ZNF534Q76KX8 674 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 SDCCAG8Q86SQ7 713 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-205ENST00000395794 MPP5Q8N3R9 675 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 OR5K2Q8NHB8 316 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 CT55Q8WUE5 264 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 CPT1BQ92523 772 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 ZNF501Q96CX3 271 aaPredicted RBP13.33□□□□□ -0.28
CXCL12-205ENST00000395794 CARD6Q9BX69 1037 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 GPR87Q9BY21 358 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 SLC25A18Q9H1K4 315 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 LATS2Q9NRM7 1088 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 STARD5Q9NSY2 213 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 OR6C2Q9NZP2 312 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 TUBD1Q9UJT1 453 aa13.33□□□□□ -0.28
CXCL12-205ENST00000395794 BHMG1C9JSJ3 638 aaPredicted RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 PRMT5O14744 637 aaPredicted RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 SNPHO15079 494 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 KPNA5O15131 536 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 ZSCAN12O43309 604 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 CREG1O75629 220 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 CYP2A7P20853 494 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 F8A1P23610 371 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 MGAT1P26572 445 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 ACADLP28330 430 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 OAS2P29728 719 aaKnown RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 VPS41P49754 854 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 GPS1Q13098 491 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 TRIP13Q15645 432 aaPredicted RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 LRRC8BQ6P9F7 803 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 TTC23LQ6PF05 361 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 SPESP1Q6UW49 350 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 UNC5AQ6ZN44 842 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 LRRC6Q86X45 466 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 PRELID2Q8N945 189 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 MR1Q95460 341 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 MAGOHBQ96A72 148 aaKnown RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 CLIP3Q96DZ5 547 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 PPM1MQ96MI6 270 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 PANX3Q96QZ0 392 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 TWSG1Q9GZX9 223 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 GNPTGQ9UJJ9 305 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 ICKQ9UPZ9 632 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 POLHQ9Y253 713 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 PCDHGA6Q9Y5G7 932 aa13.32□□□□□ -0.28
CXCL12-205ENST00000395794 MRPS18BQ9Y676 258 aaKnown RBP13.32□□□□□ -0.28
CXCL12-205ENST00000395794 TMEM150CB9EJG8 249 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 RECKO95980 971 aa13.31□□□□□ -0.28
CXCL12-205ENST00000395794 KRT14P02533 472 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms