RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ASB9Q96DX5 294 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 NSMCE3Q96MG7 304 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 DERL2Q9GZP9 239 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ZDHHC4Q9NPG8 344 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 KRCC1Q9NPI7 259 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 RSL24D1Q9UHA3 163 aaKnown RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 SDHDO14521 159 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 BMP10O95393 424 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 IGFBP6P24592 240 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 TTKP33981 857 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 FPGSQ05932 587 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 DLG1Q12959 904 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 HSPB3Q12988 150 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 GPRC6AQ5T6X5 926 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 SORCS1Q8WY21 1168 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ADI1Q9BV57 179 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 OAZ3Q9UMX2 235 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ZNF232Q9UNY5 417 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 PRKAB1Q9Y478 270 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 KRT87PA6NCN2 255 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 CXCR6O00574 342 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 THRBP10828 461 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 POU2F1P14859 743 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 PPIBP23284 216 aaKnown RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 RPL10P27635 214 aaKnown RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 GSK3BP49841 420 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 ARL10Q8N8L6 244 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 MAPK15Q8TD08 544 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 AHCYL2Q96HN2 611 aaKnown RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 SPACA7Q96KW9 195 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 NLE1Q9NVX2 485 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-203ENST00000378169 CORO2BQ9UQ03 480 aa12.95□□□□□ -0.34
NPHP4-203ENST00000378169 MAGEB17A8MXT2 336 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 NOBOXO60393 691 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 ITGA2P17301 1181 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 PREPP48147 710 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 TMED10P49755 219 aaKnown RBP12.94□□□□□ -0.34
NPHP4-203ENST00000378169 GPM6BQ13491 265 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 C11orf65Q8NCR3 313 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 BTBD9Q96Q07 612 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 TUBGCP5Q96RT8 1024 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 PKP2Q99959 881 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SEC14L3Q9UDX4 400 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 RNF11Q9Y3C5 154 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 PAPPAQ13219 1627 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 OR10H2O60403 315 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 GBAP04062 536 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
NPHP4-203ENST00000378169 IGFBP5P24593 272 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 GCAP28676 217 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 LMAN2Q12907 356 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 ITGADQ13349 1161 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SLC44A4Q53GD3 710 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SPANXN4Q5MJ08 99 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 BHLHB9Q6PI77 547 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 GOLGA7Q7Z5G4 137 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 HIPK1Q86Z02 1210 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 CYP4Z2PQ8N1L4 340 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 PGAP3Q96FM1 320 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-203ENST00000378169 CGREF1Q99674 301 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SLC32A1Q9H598 525 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 RAB26Q9ULW5 256 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SLC22A2O15244 555 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SERPINB7O75635 380 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 CAPN15O75808 1086 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SERPINA1P01009 418 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 ACP5P13686 325 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 ERVK-21P61565 698 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 AMZ2Q86W34 360 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 C12orf76Q8N812 135 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-203ENST00000378169 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 ZNF570Q96NI8 536 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 C1orf21Q9H246 121 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 SLC9A8Q9Y2E8 581 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 TESMINQ9Y4I5 508 aa12.94□□□□□ -0.34
NPHP4-203ENST00000378169 TCRBV5S1A1TA0A578 114 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 ARPC2O15144 300 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 MMP20O60882 483 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 RASGRP1O95267 797 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 ATP1B2P14415 290 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-203ENST00000378169 SLC7A1P30825 629 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 NFATC2Q13469 925 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 HERC3Q15034 1050 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 HKDC1Q2TB90 917 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 FRG2Q64ET8 278 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 OR4F3Q6IEY1 312 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 BRAT1Q6PJG6 821 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 SATL1Q86VE3 508 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 HID1Q8IV36 788 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 NXPE1Q8N323 547 aa12.93□□□□□ -0.34
NPHP4-203ENST00000378169 FBXO27Q8NI29 283 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms