RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PDLIM5Q96HC4 596 aaKnown RBP12.97□□□□□ -0.33
ACTN1-202ENST00000376839 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
ACTN1-202ENST00000376839 CCDC138Q96M89 665 aa12.97□□□□□ -0.33
ACTN1-202ENST00000376839 RBM4BQ9BQ04 359 aaKnown RBP12.97□□□□□ -0.33
ACTN1-202ENST00000376839 RBM4Q9BWF3 364 aaKnown RBP12.97□□□□□ -0.33
ACTN1-202ENST00000376839 DPY30Q9C005 99 aa12.97□□□□□ -0.33
ACTN1-202ENST00000376839 IL17CQ9P0M4 197 aa12.97□□□□□ -0.33
ACTN1-202ENST00000376839 KLQ9UEF7 1012 aa12.97□□□□□ -0.33
ACTN1-202ENST00000376839 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
ACTN1-202ENST00000376839 LOC100130705A0A1B0GUX0 176 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 ARVCFO00192 962 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 RAD51BO15315 384 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 B3GALT4O96024 378 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 RPLP2P05387 115 aaKnown RBP12.96□□□□□ -0.33
ACTN1-202ENST00000376839 ALPIP09923 528 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 PFKLP17858 780 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 SLC11A2P49281 568 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 RNF219Q5W0B1 726 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-202ENST00000376839 PTRHD1Q6GMV3 140 aaKnown RBP12.96□□□□□ -0.33
ACTN1-202ENST00000376839 FAM151BQ6UXP7 276 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 CLDN19Q8N6F1 224 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-202ENST00000376839 SPATA17Q96L03 361 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 NACA2Q9H009 215 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 PALMDQ9NP74 551 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 BAG5Q9UL15 447 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 EIF3LQ9Y262 564 aaKnown RBP12.96□□□□□ -0.33
ACTN1-202ENST00000376839 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 PRSS21Q9Y6M0 314 aa12.96□□□□□ -0.33
ACTN1-202ENST00000376839 ILVBLA1L0T0 632 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 OR6C75A6NL08 312 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 SLC38A8A6NNN8 435 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 SOBPA7XYQ1 873 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 XPNPEP2O43895 674 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 PCMT1P22061 227 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 FSHRP23945 695 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.34
ACTN1-202ENST00000376839 GABARAPL2P60520 117 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 PHEXP78562 749 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 CACNG1Q06432 222 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 CYP2A13Q16696 494 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 RUNDC3AQ59EK9 446 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 MICU2Q8IYU8 434 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 SVOPLQ8N434 492 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 CNIH3Q8TBE1 160 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 EGFL8Q99944 293 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 CCDC90BQ9GZT6 254 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 GKN1Q9NS71 199 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 VNN3Q9NY84 501 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.34
ACTN1-202ENST00000376839 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 FRMPD3Q5JV73 1810 aa12.96□□□□□ -0.34
ACTN1-202ENST00000376839 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 SCAMP3O14828 347 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 RGS14O43566 566 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 E2F6O75461 281 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 CLDN11O75508 207 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 EOMESO95936 686 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 SERPINA1P01009 418 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 RAB15P59190 212 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 PHC1P78364 1004 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 RGS21Q2M5E4 152 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ZNF691Q5VV52 312 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 MBOAT1Q6ZNC8 495 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 RGL4Q8IZJ4 473 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 NETO1Q8TDF5 533 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 WBP2Q969T9 261 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 KAT8Q9H7Z6 458 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 DCAF13Q9NV06 445 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 AASSQ9UDR5 926 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ENPP5Q9UJA9 477 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 PKP3Q9Y446 797 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 MITFO75030 526 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 CREG1O75629 220 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 GLUD1P00367 558 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 MSH3P20585 1137 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 GATMP50440 423 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 KCNC4Q03721 635 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 EPS8Q12929 822 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 GPR17Q13304 367 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 LAPTM4AQ15012 233 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 CTF1Q16619 201 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 RTP2Q5QGT7 225 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ATXN7L2Q5T6C5 722 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 CXorf57Q6NSI4 855 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 NCEH1Q6PIU2 408 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 DET1Q7L5Y6 550 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 GPR149Q86SP6 731 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 SERPINA9Q86WD7 417 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 EID3Q8N140 333 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 MTFMTQ96DP5 389 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 OR52E6Q96RD3 313 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms