RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MRPL9Q9BYD2 267 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SLC7A5P2Q9GIP4 190 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 FAM124BQ9H5Z6 455 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GIN1Q9NXP7 522 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KCTD5Q9NXV2 234 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CLDN25C9JDP6 229 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PIRO00625 290 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PRMT5O14744 637 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CLDN11O75508 207 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ANXA4P09525 319 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PROZP22891 400 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NUDT6P53370 316 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NAE1Q13564 534 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TIGD6Q17RP2 521 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KLHL12Q53G59 568 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF648Q5T619 568 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 C7orf57Q8NEG2 295 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TOP1MTQ969P6 601 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 EXOSC8Q96B26 276 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TLE6Q9H808 572 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SNX7Q9UNH6 387 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PCDHB1Q9Y5F3 818 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ATP6AP1Q15904 470 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 UNC50Q53HI1 259 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MZT2AQ6P582 158 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ART5Q96L15 291 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 Q96MT0 163 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GFM1Q96RP9 751 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GDAP2Q9NXN4 497 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TUBA8Q9NY65 449 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MANSC4A6NHS7 340 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 AQP12BA6NM10 295 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 SGTAO43765 313 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 KHDRBS3O75525 346 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CCNB2O95067 398 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 TNNI3P19429 210 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 OXTRP30559 389 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 EEFSECP57772 596 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 RHDQ02161 417 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ATAD3BQ5T9A4 648 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 OR4F3Q6IEY1 312 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 MZT2BQ6NZ67 158 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 AQP12AQ8IXF9 295 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 DPP10Q8N608 796 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 WDR48Q8TAF3 677 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 SLC2A13Q96QE2 648 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CGREF1Q99674 301 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ADAMTS10Q9H324 1103 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 SMOC2Q9H3U7 446 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 SNTG1Q9NSN8 517 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ENTPD4Q9Y227 616 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 TCAF2A6NFQ2 919 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CLTBP09497 229 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 HTR7P34969 479 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 MAPKAPK2P49137 400 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ARMC6Q6NXE6 501 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 KBTBD6Q86V97 674 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ZBTB8BQ8NAP8 495 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 HSH2DQ96JZ2 352 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF696Q9H7X3 374 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 INTS7Q9NVH2 962 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 KIAA1217Q5T5P2 1943 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 MANBAO00462 879 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 PER2O15055 1255 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 GRID2O43424 1007 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CCNYL3P0C7X3 344 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 PTNP21246 168 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 MANFP55145 182 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CHIT1Q13231 466 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF789Q5FWF6 425 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 INTS11Q5TA45 600 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 C11orf88Q6PI97 169 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 EGFL6Q8IUX8 553 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 NDNFQ8TB73 568 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ANKRD49Q8WVL7 239 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 WDR83Q9BRX9 315 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 OSBPL2Q9H1P3 480 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 MAPRE3Q9UPY8 281 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 IFI30P13284 250 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 ALDH3A2P51648 485 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 LSAMPQ13449 338 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 RFTN1Q14699 578 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 SYT16Q17RD7 645 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 PABPC1LQ4VXU2 614 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 PDCD4Q53EL6 469 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 C6orf183Q5T699 404 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CXorf40AQ8TE69 158 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 LRCH3Q96II8 777 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 TMLHEQ9NVH6 421 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 C1orf109Q9NX04 203 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 RPLP0P05388 317 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 VARSP26640 1264 aaKnown RBP6.42□□□□□ -1.38
SMC1A-202ENST00000375340 CTC1Q2NKJ3 1217 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 TIMM50Q3ZCQ8 353 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 TNFAIP8L3Q5GJ75 292 aa6.42□□□□□ -1.38
SMC1A-202ENST00000375340 SULT1C3Q6IMI6 304 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms