RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 DNASE1L3Q13609 305 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 OR2T34Q8NGX1 318 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 OR2T3Q8NH03 318 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 TWIST2Q8WVJ9 160 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 METTL21AQ8WXB1 218 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ZC3H10Q96K80 434 aaKnown RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 HNRNPABQ99729 332 aaKnown RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 FAM83DQ9H4H8 585 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 XPNPEP1Q9NQW7 623 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 GRHL1Q9NZI5 618 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 NUP50Q9UKX7 468 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 MFHAS1Q9Y4C4 1052 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 COLEC10Q9Y6Z7 277 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 B4DGG1 531 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 PPEF2O14830 753 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ANGPTL1O95841 491 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 CD247P20963 164 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 THOC7Q6I9Y2 204 aaKnown RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 AAGABQ6PD74 315 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 TMEM220Q6QAJ8 160 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 HM13Q8TCT9 377 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 EFHD2Q96C19 240 aaPredicted RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 GPR21Q99679 349 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 HOPXQ9BPY8 73 aaPredicted RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ZSCAN5AQ9BUG6 496 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ERVK-5Q9HDB9 667 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 BBIP1A8MTZ0 92 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 INSIG1O15503 277 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ABHD2P08910 425 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 LRRC20Q8TCA0 184 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 PLD4Q96BZ4 506 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 ZFP3Q96NJ6 502 aa14.1□□□□□ -0.15
TRAF1-201ENST00000373887 MCCC1Q96RQ3 725 aaPredicted RBP14.1□□□□□ -0.15
TRAF1-201ENST00000373887 IGKV6D-41A0A0C4DH26 115 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 MMP8P22894 467 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 CDH12P55289 794 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 RPS24P62847 133 aaKnown RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 CHAF1BQ13112 559 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 CCDC28BQ9BUN5 200 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TRPS1Q9UHF7 1281 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 CORO1CQ9ULV4 474 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TIMM8BQ9Y5J9 83 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 OR2AT4A6NND4 320 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 PLK4O00444 970 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TOR1BO14657 336 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 POP4O95707 220 aaKnown RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 AIF1P55008 147 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ABCA11PQ4W5N1 156 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 UBXN11Q5T124 520 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 VWA5B1Q5TIE3 1220 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 MON1BQ7L1V2 547 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ANKRD46Q86W74 232 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 LCN9Q8WX39 176 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 FEM1AQ9BSK4 669 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TAPBPLQ9BX59 468 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 UPB1Q9UBR1 384 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 INPPL1O15357 1258 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 LDOC1O95751 146 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 NRLP54845 237 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 SLC9A4Q6AI14 798 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 BEND7Q8N7W2 519 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 FBXO15Q8NCQ5 510 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 RFT1Q96AA3 541 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 MYOM1P52179 1685 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 A8MU76 341 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 PAPSS2O95340 614 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 PSKH1P11801 424 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ASPAP45381 313 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ADAM8P78325 824 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TEAD2Q15562 447 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ENPP7Q6UWV6 458 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 SIDT2Q8NBJ9 832 aaKnown RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ZNF548Q8NEK5 533 aaPredicted RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 IRGQQ8WZA9 623 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ALG3Q92685 438 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 MINDY3Q9H8M7 445 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TLR9Q9NR96 1032 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 CDH22Q9UJ99 828 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 YIPF1Q9Y548 306 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 AIREO43918 545 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 ITIH1P19827 911 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 IL12BP29460 328 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 TRMT61BQ9BVS5 477 aaKnown RBP14.09□□□□□ -0.15
TRAF1-201ENST00000373887 DNAJC28Q9NX36 388 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 WNT6Q9Y6F9 365 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 SIGLEC1Q9BZZ2 1709 aa14.09□□□□□ -0.15
TRAF1-201ENST00000373887 LRRC10BA6NIK2 292 aa14.08□□□□□ -0.15
TRAF1-201ENST00000373887 PLOD2O00469 737 aa14.08□□□□□ -0.15
TRAF1-201ENST00000373887 LRCH4O75427 683 aa14.08□□□□□ -0.15
TRAF1-201ENST00000373887 USF2Q15853 346 aaPredicted RBP14.08□□□□□ -0.15
TRAF1-201ENST00000373887 LRRC19Q9H756 370 aa14.08□□□□□ -0.15
TRAF1-201ENST00000373887 SNTG1Q9NSN8 517 aa14.08□□□□□ -0.15
TRAF1-201ENST00000373887 TCRBV7S2A1N4TA0A589 114 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 OR1F1O43749 312 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 CACNG1Q06432 222 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 PUM1Q14671 1186 aaKnown RBP eCLIP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms