RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 KPNA5O15131 536 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 PFDN6O15212 129 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 TP73O15350 636 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 ESR1P03372 595 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 POLR2CP19387 275 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-205ENST00000372244 MORF4L2Q15014 288 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 IZUMO3Q5VZ72 239 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 ARMC6Q6NXE6 501 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 AMIGO1Q86WK6 493 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 ADGRF3Q8IZF5 1079 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 NKD1Q969G9 470 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 STAMBPL1Q96FJ0 436 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 HGH1Q9BTY7 390 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 TRIT1Q9H3H1 467 aaKnown RBP19.44■□□□□ 0.7
TMEM53-205ENST00000372244 CPNE5Q9HCH3 593 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 LATS2Q9NRM7 1088 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 INTS10Q9NVR2 710 aaKnown RBP19.44■□□□□ 0.7
TMEM53-205ENST00000372244 RALYQ9UKM9 306 aaKnown RBP19.44■□□□□ 0.7
TMEM53-205ENST00000372244 POMT2Q9UKY4 750 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 CRYL1Q9Y2S2 319 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 PCDHB11Q9Y5F2 797 aa19.44■□□□□ 0.7
TMEM53-205ENST00000372244 UBA6A0AVT1 1052 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 K7ENP7 123 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 SMAPO00193 183 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 MATN2O00339 956 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 TTI1O43156 1089 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 PRDX3P30048 256 aaKnown RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 CASQ1P31415 396 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 FMO4P31512 558 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 CSE1LP55060 971 aaKnown RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 EIF3BP55884 814 aaKnown RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 HSD11B2P80365 405 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 VAC14Q08AM6 782 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 LONRF1Q17RB8 773 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 ZNF789Q5FWF6 425 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 HIBCHQ6NVY1 386 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 INO80CQ6PI98 192 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 D2HGDHQ8N465 521 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 OTUD6BQ8N6M0 293 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 PPM1MQ96MI6 270 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 EBNA1BP2Q99848 306 aaKnown RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 XKR8Q9H6D3 395 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 ICKQ9UPZ9 632 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 VPS9D1Q9Y2B5 631 aa19.43■□□□□ 0.7
TMEM53-205ENST00000372244 TMEM184BQ9Y519 407 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-205ENST00000372244 H3BMM5 538 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 BTN3A1O00481 513 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 FGF5P12034 268 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 FOLR1P15328 257 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 CXADRP78310 365 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 FOXM1Q08050 763 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 DHX9Q08211 1270 aaKnown RBP19.42■□□□□ 0.7
TMEM53-205ENST00000372244 PRKAA1Q13131 559 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 ZNF470Q6ECI4 717 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 SYT10Q6XYQ8 523 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 UNC5AQ6ZN44 842 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 OTOAQ7RTW8 1153 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 GPR155Q7Z3F1 870 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 IGDCC3Q8IVU1 814 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 LMNTD2Q8IXW0 634 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 OR6C1Q96RD1 312 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 NAT9Q9BTE0 207 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 C1GALT1Q9NS00 363 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 OR6C2Q9NZP2 312 aa19.42■□□□□ 0.7
TMEM53-205ENST00000372244 SEC31AO94979 1220 aaKnown RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 ZBTB11O95625 1053 aaPredicted RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 TTC4O95801 387 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 PGAM1P18669 254 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 ABRQ12979 859 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 CTBP1Q13363 440 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 THOC5Q13769 683 aaKnown RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 GBX1Q14549 363 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 PLEKHS1Q5SXH7 462 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 UNC5DQ6UXZ4 953 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 CCDC81Q6ZN84 652 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 BPHLQ86WA6 291 aaPredicted RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 DENND6AQ8IWF6 608 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 SPATA4Q8NEY3 305 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 CALML6Q8TD86 181 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 KRT12Q99456 494 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 TRIM51Q9BSJ1 452 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 PITPNM3Q9BZ71 974 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 C20orf96Q9NUD7 363 aaPredicted RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 BTRCQ9Y297 605 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 SMG1Q96Q15 3661 aaKnown RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 CACNA1GO43497 2377 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 BANF1O75531 89 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 DLGAP3O95886 979 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 PKMP14618 531 aaKnown RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 SHMT2P34897 504 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 CBLBQ13191 982 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 SRSF6Q13247 344 aaKnown RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 GRB7Q14451 532 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 KCNAB1Q14722 419 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 TMED2Q15363 201 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 ARHGAP40Q5TG30 622 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 TIPARPQ7Z3E1 657 aaKnown RBP19.41■□□□□ 0.7
TMEM53-205ENST00000372244 UNC5BQ8IZJ1 945 aa19.41■□□□□ 0.7
TMEM53-205ENST00000372244 PDIK1LQ8N165 341 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms